Gene Information

Name : Dred_0866 (Dred_0866)
Accession : YP_001112229.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : transposase, IS204/IS1001/IS1096/IS1165 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 921260 - 922564 bp
Length : 1305 bp
Strand : +
Note : PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: msu:MS1646 hypothetical protein

DNA sequence :
ATGGATATACTCAATTTACCTCACTTCAAAGTATTACATGTAGAACAAACAGAACACGATTACAGCATTAGGGCAGAAAT
GGCCTCACCGCCCATTATCTGCCCTAATTGTTATAATAGGGACTTTGTCGGATACGGTAAGAAAGAACAACTATTCATGG
ACTTGCCGATCCACGGCAAGCGTGTGGGTATCCTAGTTAACCGTAGGCGGTACCGGTGTAAAGAGTGCAATAAGACGTTC
CTAGAGATATTACCAGACATGGACGAAAAACGTCTGGCCACCACCAGGTTAATTGAATATGTCCAGAAGCAGTCCTTAAA
GCGTACATTCGCCAGCATATCCGAGGACGTGGGCCTGGATGAAAAGACAGTTCGTAACATCTTCCGTGATTACGTTACTC
ACCTGGAGAAAACCGTAAGGTTTGCCACCCCGGAGTACCTGGGGATAGATGAAATCCACATCATCCACCCTCGCTGCGTG
GTCTGTAACGTCAAGGACAGAACAATAATCAATATTCTGCAAAACCGGAACAAAGAGACAGTGATTAAGTACCTCATGGA
GCTACCGGACAGGGATAGGGTTAAGTATGTCAGCATGGATATGTGGCAGCCGTACCGGGATGCAGTTAAGTTGGTCTTGC
CCCAGGCTAAAATAATCGTGGACAAATTTCACGTCCTCCGCATGGCTAACCAGGGCGTGGAAACAGTTAGGAAAGACATA
AGGGCAAACATGACACCCAAGCAACGCCGTACCCTAATGCACGATAGGTTTGTCTTGCTGAAACGCAGGCACGAGCTGAA
AGAGGCCGAATTTCTCAAACTCGAATCATGGACTAAGAACCTCCCGGATCTTGGCAAAGCCTACGAGTTGAAAGAAGAGT
TTTTCCAAGTGTATGAAAGTAAGAACCAGGCTGAAGCTATTGAACGTTACAACGCCTGGCTTTCTAAGGTTACTGATGAG
ATTTGCTTTGCCTTTGAACCATTAATAAAAGCCCTAACTAACTGGCACCATGAGGTCTTTAACTACTTCAACCACCCCAT
TACCAACGCCTACACTGAGGCCCTGAATGGGCTAATCCGGGTTATGAACCGCCTGGGTAGAGGGTATTCCTTTGAAGCTT
TACGGGCTAAGATCCTGTTCACCGAAGGGCTATCCAAGTCTAAGAGGCCCTTGTACCGGAGACAGAACCGGGAACCTATT
ATGAGCAGGATGGTTATTGCAGAAACAACCATAGATTACCAGAACTGGGATACCGGAGTACCCATAACAACATTGGTTGA
TTTTATTGAAAAAGGAAAAATCTAG

Protein sequence :
MDILNLPHFKVLHVEQTEHDYSIRAEMASPPIICPNCYNRDFVGYGKKEQLFMDLPIHGKRVGILVNRRRYRCKECNKTF
LEILPDMDEKRLATTRLIEYVQKQSLKRTFASISEDVGLDEKTVRNIFRDYVTHLEKTVRFATPEYLGIDEIHIIHPRCV
VCNVKDRTIINILQNRNKETVIKYLMELPDRDRVKYVSMDMWQPYRDAVKLVLPQAKIIVDKFHVLRMANQGVETVRKDI
RANMTPKQRRTLMHDRFVLLKRRHELKEAEFLKLESWTKNLPDLGKAYELKEEFFQVYESKNQAEAIERYNAWLSKVTDE
ICFAFEPLIKALTNWHHEVFNYFNHPITNAYTEALNGLIRVMNRLGRGYSFEALRAKILFTEGLSKSKRPLYRRQNREPI
MSRMVIAETTIDYQNWDTGVPITTLVDFIEKGKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 5e-131 56
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 8e-84 45
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-83 45
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-83 45
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 2e-83 45
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 8e-84 45
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 8e-84 45
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 8e-84 45