Gene Information

Name : Dred_0630 (Dred_0630)
Accession : YP_001111995.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 675872 - 676570 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sth:STH1041 two-component response regulator

DNA sequence : 
ATGAATAACGGAACGATATTGATTGCAGATGATGATCATAGAATTGTTAAAATAGTTTCTCATAGTCTGGAACAGGAGGG
GTACAGGGTAATAACTGCTAAGGACGGGGAACAAGCTGTTCAATTAGCCACCACCATGAAGCCAGATATTGTTATTATGG
ATATCATGATGCCTAAACTGGACGGGTTAGAGGCTTCCCAGAAAATTAAGATGAAAGTCGATGTTCCTATCATCATATTG
TCTGCCAAAGATGATGTTGTTGACAAAATTGTTGGGTTTAAAATGGGAGTGGATGATTACCAAACAAAACCCTTTAGTCC
CGCGGAATTGGCCCTAAGGGTAAAAGCAGTTCTAAGAAGAAGCAAAGCTGTACCGGAAAAGAAGGGCAAGGATGTACTGG
ATTACCAAAATTTTTATATAGAATATTCTACCCGTCTTGTCCGAATATGGGGGAAGGAAGTTACGCTTACCGCAAAGGAG
TTTGACATGCTTTGGCTGATGGCCTCCCATCCCAACCAAATCTTCTCCCGCCTCCAATTATTAGAACAAATTTGGGAGAG
TCATTTTGAAGGGGATGAGGATACCGTAACAGTTCATATTAGAAGGCTAAGGAGAAAAATAGAAAGGGATGCTGCTAAGC
CAGAGTTGATTAAAACTGTTTGGGGAGTTGGTTATAAATTTGAGGCGCCCAAGGAATAA

Protein sequence : 
MNNGTILIADDDHRIVKIVSHSLEQEGYRVITAKDGEQAVQLATTMKPDIVIMDIMMPKLDGLEASQKIKMKVDVPIIIL
SAKDDVVDKIVGFKMGVDDYQTKPFSPAELALRVKAVLRRSKAVPEKKGKDVLDYQNFYIEYSTRLVRIWGKEVTLTAKE
FDMLWLMASHPNQIFSRLQLLEQIWESHFEGDEDTVTVHIRRLRRKIERDAAKPELIKTVWGVGYKFEAPKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-41 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dred_0630 YP_001111995.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 4e-48 46
Dred_0630 YP_001111995.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 8e-47 44
Dred_0630 YP_001111995.1 two component transcriptional regulator NC_012469.1.7685629. Protein 1e-39 44
Dred_0630 YP_001111995.1 two component transcriptional regulator HE999704.1.gene2815. Protein 3e-40 41
Dred_0630 YP_001111995.1 two component transcriptional regulator NC_012469.1.7686381. Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dred_0630 YP_001111995.1 two component transcriptional regulator VFG1563 Protein 4e-41 41
Dred_0630 YP_001111995.1 two component transcriptional regulator VFG1702 Protein 9e-41 41