Gene Information

Name : Dred_0415 (Dred_0415)
Accession : YP_001111787.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 456296 - 457180 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGCAAGAACAGGGTACATGGACACTTAAAAAAGGACTGGCTGAAATGTTAAAAGGTGGAGTTATTATGGATGTAACAAC
ACCGGAACAAGCTAGAATAGCAGAAAATGCCGGGGCTTGTGCAGTAATGGCTTTAGAGAGAGTTCCTGCAGATATTAGAG
CTGCAGGTGGAGTAGCTAGAATGGCAGATCCTACTGTAGTATTACGAATTATGGATGCTGTTACAATTCCTGTAATGGCT
AAGGCAAGAATTGGTCATTTTGTGGAAGCACAGATTTTAGAAGGTTTAGGAGTAGATTATATTGACGAAAGTGAAGTTTT
AACTCCTGCTGATGAATTATTTCATATTAATAAAAATACATTTAAGGTTCCCTTTGTATGTGGTTGCCGTAACTTAGGAG
AAGCATTGCGTCGTATTGGCGAAGGTGCTGCCATGATTAGAACTAAAGGAGAGCCAGGTACTGGAAACGTGGTTGAGGCA
GTAAGACATTTTCGCCAAGTAAACAGTGAAATTAAGAAAATAATGAATTTACCTGAAGAAGAGTTAATGACTGTTGCCAA
AGAAATAGGTGCACCTTTTGAATTAGTAAAAGTAGTACATCAGACGGGTAAATTACCTGTGGTTAATTTTGCTGCGGGTG
GAATTGCAACTCCTGCGGATGCTGCGCTTATGATGCAATTAGGTGTTGATGGCGTATTTGTGGGTTCTGGCATATTTAAG
TCTGGAGACCCAATGAAAAGAGCTAAGGCTATTGTAGCTGCTACAACCTATTATAATGATCCCCAGGTTTTGGCTGAAGT
GTCTAAGGATTTAGGGGAACCTATGGTAGGTATTGAGATTCACAATATTAAAGCTGAAGAAAGAATGCAAGATAGAGGTT
GGTAG

Protein sequence :
MQEQGTWTLKKGLAEMLKGGVIMDVTTPEQARIAENAGACAVMALERVPADIRAAGGVARMADPTVVLRIMDAVTIPVMA
KARIGHFVEAQILEGLGVDYIDESEVLTPADELFHINKNTFKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVVEA
VRHFRQVNSEIKKIMNLPEEELMTVAKEIGAPFELVKVVHQTGKLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFK
SGDPMKRAKAIVAATTYYNDPQVLAEVSKDLGEPMVGIEIHNIKAEERMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 69
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-88 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 69