Gene Information

Name : Dred_3307 (Dred_3307)
Accession : YP_001114632.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3589204 - 3589626 bp
Length : 423 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mta:Moth_0129 single-strand binding protein

DNA sequence :
ATGCTCAATAAGATCATATTAATTGGGCGTCTGACCCGGGATCCAGAACTACGATATACCACAAATGGCGTTGCTGTGGC
AAGACTGACAATAGCGGTTGATCGCCCGCAATTTAATAGAGAAAGAGAAAAGGAAACGGATTTTATTGACATTGTTGTAT
GGCAAAAGCTGGCTGAAACCTGTGCTAATAACCTAGGCAAGGGTCGCTTAATTGCTGTGGATGGTCGTTTACAAATCCGC
TCCTATGATGACAGCCAGGGTATAAGACGTAAAGCTGCAGAAGTTGTGGCAGACTCTATCCGCTTCCTGGATTGGCCCAA
AGACAGGGACAACCAGGGTGGTGGCCAGTTTAACAGTGGTAGCGGTAGCGGCAGTGGTTTTGGAAGCGAAATTAGCTTTA
ACGGAGATGACATACCGTTCTAG

Protein sequence :
MLNKIILIGRLTRDPELRYTTNGVAVARLTIAVDRPQFNREREKETDFIDIVVWQKLAETCANNLGKGRLIAVDGRLQIR
SYDDSQGIRRKAAEVVADSIRFLDWPKDRDNQGGGQFNSGSGSGSGFGSEISFNGDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 7e-23 56
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-22 56
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-23 56
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-23 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-23 55
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-22 54
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-20 54
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-23 54
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-23 54
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-21 53
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 7e-23 53
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-18 45
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 7e-15 44
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-14 44