Gene Information

Name : Dred_3209 (Dred_3209)
Accession : YP_001114536.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 3489061 - 3490257 bp
Length : 1197 bp
Strand : -
Note : KEGG: bsu:BG11370 glycine betaine transport system ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGACAAAAATTAAGGTCGAGAATCTGATCAAGATTTTTGGTCCCAAACCAAATAAAGCCATAGAACTTTTACAAAAAGG
AAAAACAAAGCAAGAAATATTACAAGAGACAGGATTAACCGTAGGAGTAAACCAAGCTAATTTTCAGGTTTATGCAGGAG
AGATATTTGTCATCATGGGGTTATCCGGTAGTGGGAAATCCACTCTGGTACGTTTATTAAACCGTCTCATTGAACCAACC
AGTGGAAAAATCGAAATCGATGGCGAAGACATTGCAACCATGAGCAAGGAGCAGCTTCGGGAAGTTCGCAGGAAAAAGTT
AAGCATGGTGTTTCAACGGTTTGCCCTATTCCCCCACAGAACTGTCCAGCAAAATGTAGAATACGGCTTGGAGGTTCAGG
GCGTATCCCCTGAGGAACGCAGAGAAAAGGCAGTACAGTCACTGGCTCTGGTGGGATTGGCTGGTTGGGAAAACAGTTAT
CCTGGTCAGTTGAGTGGTGGTATGCAGCAAAGAGTGGGGCTGGCCAGGGCCCTGGCCAATGACCCCGACGTATTGCTGAT
GGATGAGGCCTTCAGTGCCCTTGATCCTTTAATCCGTAAGGACATGCAGGACGAACTTCTGGAATTGCAATCTACTATGC
ATAAGACCATTATCTTTATTACCCATGACCTGGATGAAGCTTTGAAAATTGGGGACAGAATTGCCCTGATGAAGGATGGT
AAAATTGTACAAATTGGTACGCCGGAAGAAATTCTAACCAACCCGGCCAATGAATATGTAGAAAAATTTGTAGAAGATGT
GGACATGTCCAAGGTATTAACGGCAGAGCACGTGATGAAGAGACCGGAGACCATCACCCTAAATAAAGGACCAAGGGTTG
CACTGCAACTAATGAAGGATAGCGGAGTTTCCAGCCTATATGTCGTAGACAGCAAAAAGACCTTACTGGGTGTGGTGAAG
GCAGACGCAGTATCGAAGGCCAAGCAGGAGGGATTAACCCTGGAGGAAGTGATGGAAACAGATGTTCCGGTTGTAGCTCC
GGATACTCGGTTGCATGATCTGTTCGATATCATTGCCTTTTCTCCGGTGCCCTTGGCAGTGGTAAATGAGCAACGGCGTT
TATCAGGAGTCATTGTTCGTGGAGCTGTACTGGGTGGACTTGCCGGAAAAGTTAACCAAGATGAAAAAATCTGTTAG

Protein sequence :
MTKIKVENLIKIFGPKPNKAIELLQKGKTKQEILQETGLTVGVNQANFQVYAGEIFVIMGLSGSGKSTLVRLLNRLIEPT
SGKIEIDGEDIATMSKEQLREVRRKKLSMVFQRFALFPHRTVQQNVEYGLEVQGVSPEERREKAVQSLALVGLAGWENSY
PGQLSGGMQQRVGLARALANDPDVLLMDEAFSALDPLIRKDMQDELLELQSTMHKTIIFITHDLDEALKIGDRIALMKDG
KIVQIGTPEEILTNPANEYVEKFVEDVDMSKVLTAEHVMKRPETITLNKGPRVALQLMKDSGVSSLYVVDSKKTLLGVVK
ADAVSKAKQEGLTLEEVMETDVPVVAPDTRLHDLFDIIAFSPVPLAVVNEQRRLSGVIVRGAVLGGLAGKVNQDEKIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 2e-108 59