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Name : Dred_3050 (Dred_3050) Accession : YP_001114377.1 Strain : Desulfotomaculum reducens MI-1 Genome accession: NC_009253 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3310224 - 3312065 bp Length : 1842 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: dsy:DSY3 DNA sequence : ATGACCAACAAATTTAGAATACCTTTATTAATGCTCTGTGACGCAGTTTTAGTAAATCTGGCCTTTTTGATTCCCTGCTA TATTCATTATCACGGCCAATTTACCCAGGAGTACTTGGCCGACATGCGGGGTTTTCTTCTGGCTACACCGGTTATTTTAC TTGTTTTTTATGGCTCCAAGCTATACCACCGTGTTTGGGCCTATGCAAGCACCGGAGAATTACTTACCATTATTCAATCT GTTTCGTTAGTAAGCCTCTTATTTTTTATCCTCACCCATTTTATAGATGAACCTCACTTAGGAAAAACAATTTTATCCTT TTGGGCCTTTGCCATTATTTTTGTTGGCGGTTCCAGGTTTGCCTGGCGACTGTATGTTGAGTATAAAGCGAAAAAAGGAT ATGTCAGAATGGGAACTCCCAAAAGAGCTTTGATTTATGGTGCAGGTTCCGCCGGTGCCCTGGTGGCCAGAGAATATAAA AATCACTACAACGGCAATCAACCGGTTATTGGTTTTATCGATGATGATACCAAGAAACACCACCTGAGTATTTATGATCT GCCTGTACTGGGCGGCAGAGAAAGTATTCCTTCATTAATATGTAAACATAACATAGATGAAATTATCATTGCTATGCCTT CGGTTGCCGGAAAAAGTATGCGTGATATTATTCAGTTCTGTAAGGATACGGTGGGAGAGGTTAAGATCCTACCGGGTGTT TACCAGTTTTTAAATGGCAATGTTTCCATAAGTAAAATTCGACCTGTAGAGATTGAGGATTTGCTGGGCAGGGAACCAGT ACAGGTGGATCTTAAGGAAATATCCCTTTATCTCAAGGGAAAAGTGGTCCTGGTAACCGGCGCCGGTGGCTCCATCGGTT CCGAGTTGTGCCGCCAAATCGCACAAATGGACCCGGCCAAAATTATTCTGCTGGGCCATGGGGAAAACAGCATCCATAAA ATTTGGTTGGAGTTACGGGACAAGTTCCCCCTGGTGCCCCTGGAAGTAGAGATCGCCGATGTTCGGGACCGTTTTAAACT ACAACTAACCTTTGAAAAGCACCAACCGCATGTTGTCTTTCATGCCGCAGCCCATAAGCATGTGCCGCTGATGGAAATGC ACCCGGATGAAGCTGTGAAAACCAACGTCTTTGGGACAAAAAATGTGGCTGAAATGGCAGATCGGGTAGGATGCGAAAGA TTTGTTCTGATCTCTACGGATAAGGCGGTTAACCCTTCCAGTGTTATGGGAGCAACCAAACGGATAGCAGAACTGGTGAT TCAGAATTTGTTCAAGGGGTCCCATACCAAGTTTGCTGCGGTGCGCTTTGGCAATGTGCTGGGCAGTCGGGGTAGCGTTG TGCCCATCTTCAAAGAACAAATTGCCCGGGGGGGTCCTGTTACGGTGACTCACCCGGATATGACCCGCTACTTTATGACC ATCCCGGAAGCAGTGCAACTGGTGATTCAAGCTGGTGCCATGGCCGAGGGTGGGGAGGTTTTCCTGCTGGATATGGGGGA ACCGGTTAAGATTGTGGATTTGGCGGCTAACCTTATAAAGCTATCTGGCTTTGAGCCAGGGAAGGATATTGAGATTAAAT ATACCGGCATCCGTCCAGGGGAAAAACTTTTTGAGGAATTGCTGACGGCTGAAGAGGGTTCCTCCAGCACCAAGCACAAA AGGATTTTTGAGGCAAAGCCGGTGGAGATTGATGAGGCAGTGCTGCTGCAGGAACTGCTGAAGCTGGAGAAGAGGGAAGT AACGGAGCACCAGGAGATTTTTGGCAGGTTGTTGCGGGTGATGCCGGAGTTGGTGCTGTATGTGGAGGGCAGGACGGCTT AG Protein sequence : MTNKFRIPLLMLCDAVLVNLAFLIPCYIHYHGQFTQEYLADMRGFLLATPVILLVFYGSKLYHRVWAYASTGELLTIIQS VSLVSLLFFILTHFIDEPHLGKTILSFWAFAIIFVGGSRFAWRLYVEYKAKKGYVRMGTPKRALIYGAGSAGALVAREYK NHYNGNQPVIGFIDDDTKKHHLSIYDLPVLGGRESIPSLICKHNIDEIIIAMPSVAGKSMRDIIQFCKDTVGEVKILPGV YQFLNGNVSISKIRPVEIEDLLGREPVQVDLKEISLYLKGKVVLVTGAGGSIGSELCRQIAQMDPAKIILLGHGENSIHK IWLELRDKFPLVPLEVEIADVRDRFKLQLTFEKHQPHVVFHAAAHKHVPLMEMHPDEAVKTNVFGTKNVAEMADRVGCER FVLISTDKAVNPSSVMGATKRIAELVIQNLFKGSHTKFAAVRFGNVLGSRGSVVPIFKEQIARGGPVTVTHPDMTRYFMT IPEAVQLVIQAGAMAEGGEVFLLDMGEPVKIVDLAANLIKLSGFEPGKDIEIKYTGIRPGEKLFEELLTAEEGSSSTKHK RIFEAKPVEIDEAVLLQELLKLEKREVTEHQEIFGRLLRVMPELVLYVEGRTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-94 | 50 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-98 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dred_3050 | YP_001114377.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-98 | 46 |
| Dred_3050 | YP_001114377.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 6e-76 | 44 |
