Gene Information

Name : Dred_3000 (Dred_3000)
Accession : YP_001114328.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Virulence
Product : exopolysaccharide tyrosine-protein kinase
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.1
Position : 3263217 - 3263945 bp
Length : 729 bp
Strand : -
Note : TIGRFAM: capsular exopolysaccharide family; KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein

DNA sequence : 
ATGATGTTAAATAACAGACTCGTGGTTTTGGAGAACCCTAAATCACCGGTAGCAGAGGCCTATCGCATAGCCCGAACCAA
TATTCAATTTGCAGCTGTTGATAAAGAGCTTAAAACATTATTAATAACCAGTTCCGGTCCAGCCGAAGGGAAATCCACCA
CTGCTGCGAATCTAGGCATTGCCTTTGCCCAATCTGGTAAAAGCGTCATTATTGTTGATGCTGATTTACGCAAGCCAACC
CAGCATAAGGTATGGGAAATTGATAATATTATTGGCCTTACCAACATACTGCTGGGGGACACTGAGATAGCCACAGCCTT
ACAACCTTCCCCCATGAAGAATTTACATATCGTAACCACCGGGCCCATTCCTCCTAACCCAGCCGAATTGCTCGGGTCCC
AAAGAATGACTGCTTTACTGACATCCTTCCGTGAACATGCAGATATTATTATCATTGATTCCCCGCCCATTATTGCTGTT
ACCGATGCGGCTTTGCTGGCACCCCAGGCGGATGGGGTTGTTTTGGTTGTTGCATCGGGACAGGCCAAAATTGAAACAGC
CCAGAAGGCAAAGCAAATGCTTTTAAATGGTAAAGCGAAGATCCTGGGAACCATCTTAAATATGGTGGAAGAGGACAGTC
AGGATTACTACTATTATTATTACTATGGTGAAGGCAGCGGTGATAAAAAGAAAGGAAAAAAAAGAGGCCATAAGGCAGCT
TGTTTATAA

Protein sequence : 
MMLNNRLVVLENPKSPVAEAYRIARTNIQFAAVDKELKTLLITSSGPAEGKSTTAANLGIAFAQSGKSVIIVDADLRKPT
QHKVWEIDNIIGLTNILLGDTEIATALQPSPMKNLHIVTTGPIPPNPAELLGSQRMTALLTSFREHADIIIIDSPPIIAV
TDAALLAPQADGVVLVVASGQAKIETAQKAKQMLLNGKAKILGTILNMVEEDSQDYYYYYYYGEGSGDKKKGKKRGHKAA
CL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dred_3000 YP_001114328.1 exopolysaccharide tyrosine-protein kinase VFG1298 Protein 3e-33 41