Gene Information

Name : Dred_2312 (Dred_2312)
Accession : YP_001113647.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2529282 - 2531033 bp
Length : 1752 bp
Strand : -
Note : PFAM: pyruvate kinase; PEP-utilising enzyme, mobile region; KEGG: chy:CHY_1144 pyruvate kinase

DNA sequence :
ATGAGACGTACAAAGATTGTTTGCACCATCGGTCCCGCCAGTGAAGATGTGGAAACGCTGAAAAATATGATGCTGGCAGG
CATGAATGTTGCAAGATTAAACTTTTCCCATGGTACCCATGAGGACCATGCCAAGAGAATTGCTGCTATTCGCCAGTCTG
CAGATGAATTAAACAAAAATATTGCCATTCTGCTAGATACCAAGGGTCCGGAAATTCGTTTAAAGAAATTTGCCCAACCG
CCGGTTATCCTAAAACAGGATCAGCAATTTACCCTGACAACCAGGGAGGTTACCGGTGACAATACCATTGTGTCTGTAAC
TTATCAGGATTTGCCCAAGGATGTGAAGCCTGGCAGTCGGATAGCTGTGGCAGATGGGTTAATCGAAATGGTTGTGGAAT
CTGTGGAGGGACCAGATGTTCATTGTAGAGTCGTTAATGGTGGTCAACTTTCCAACCAGAAGGGAGTTAATTTACCTGGT
GTAAATGTAAACCTTCCTTCGATTACCGAAAAGGATATTGAGGACATTCGCTTTGGTATAGAGCAAAGGGTAGATTTTAT
TGCTGCATCCTTTATTCGCAAACCCGGGGATGTCCTCGCCATTCGCCAAATCCTTGAGGAATATGATGCGGATATTGATA
TCATAGCTAAGATTGAAAGTCGCCAGGGTGTGGAGAATCTGACTGGTATTATTAATGTTGCAGATGGTATCATGGTGGCC
AGAGGTGACTTGGGCGTTGAAATCCCTGCAGAAGAAGTACCTGTCTTACAAAAGACGATGATTGAAATGTGCAACAGGGC
AGGTAAACCAGTTATTACTGCTACACAAATGCTGGAGTCCATGACCCAGAATCCAAGACCAACCAGGGCCGAGGCCAGCG
ATGTGGCTAATGCCATTTTTGATGGAACCGATGCAATTATGCTTTCCGGCGAAACAGCTGCGGGTAAGTATCCTGTACAA
ACCGTTGAAACCATGGCTCGTATTGCCCAGCGGGCAGAGCTTGCTGTAAATTTTGATGACCTGCTGGAAATCAGAGGAGC
TGCCATACAGAGAACGGTCACCGATGGTATTAGCCAGGCCGTTTGCAGTGTGGCTAGGGAATTGGGTGTAACCGCCATTG
TAACCGCGACGGCCAGCGGACATACCGCCAGAATGATTTCCAAGTATAGGCCCAAAGTACCTGTGATTGCTGTGACACCC
AGATCCAATGTGTTAAGAAAAATGGCTCTGGTTTGGGGGGTTGTTCCTCTTTTAATTGAAGATGTACATGGTACAGATGA
AATGATTAATATATCCGTGGAAGCGGCCCTGGCCTCCGGACATATTACTGCTGGCGACCTAATTGTTATTACTGCCGGTG
TACCGGTGGGTGTTCATGGTACCACCAATATGATGAAGGTTCACACAGTGGGGACTCTGCTGGCCAAAGGAACAGGCATT
GGCCAGAAAGCTGTCACAGGTAAGGTTAGGATTTGTCGAACGGCGGAGGAAGCCATGGTTAAGGTTCAGCCGGGTGATAT
TTTGGTGACTATGGCCACTGATCGTGACTTCGTGTCTGCTATGCAGAAAGCCAAAGCCGTGATAACGGAAGAAGGTGGTC
TTACTTCCCATGCTGCCATTGTGGGACTGGAATTTGGCTTACCCGTTATAGTAGGCGTTGATAACGCCACTGGTATTCTA
CCAGACGATGAAATTATTACGGTGGATAGCCAGCGAGGGCTGATTTACGGCGGTGTTGCCAGAGTTTTATAG

Protein sequence :
MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKNIAILLDTKGPEIRLKKFAQP
PVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSRIAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPG
VNVNLPSITEKDIEDIRFGIEQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA
RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPVQ
TVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQAVCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTP
RSNVLRKMALVWGVVPLLIEDVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI
GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAIVGLEFGLPVIVGVDNATGIL
PDDEIITVDSQRGLIYGGVARVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-103 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-104 49
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-104 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-103 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dred_2312 YP_001113647.1 pyruvate kinase VFG0479 Protein 3e-104 49