Gene Information

Name : Dred_2093 (Dred_2093)
Accession : YP_001113435.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 2288555 - 2289685 bp
Length : 1131 bp
Strand : -
Note : KEGG: mta:Moth_0915 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGGATCAGGACAGGCACTATATGAACATGGCCCTTGAACTGGCAGCCAAGGCTAGAGGACGCACCAGCCCTAATCCTAT
GGTGGGAGCTGTTTTGGTTAAGGATGGGGAAGTGGTTGGCAAAGGTTTTCATGCCAAAGCAGGCGGTGCCCATGCAGAAG
TAGTGGCGTTGGCCGATGCTGGTGATCGGGCAAAGGGAGCCACAGTGTATGTAACATTGGAACCTTGTTGTCATCATGGG
AAAACCGGACCTTGTACAGAGGCATTGAAAAAAGCAGGGGTTAAAAGGGTTGTGGCCGCCATGACTGACCCGAACCCTTT
GGTTGCAGGTAAGGGCTTAAATATTTTAAAGGATGCCGGTATAGAAGTGGTATCCGGTTTGTTGGAGGAAGAAGCAAAGG
AATTAAATGAGGTTTTTATTAAATATATAACAACAAAAATACCCTTTATTGTCTTAAAGGCTGCCACCAGCTTGGATGGT
AAAATAGCAACAGCCAGTGGGGAATCTAAGTGGATTACCGGTGATACAGCCAGAAATTATGGACACAGATTAAGGGATGC
CTACGATGCCATATTGGTGGGGGTTAATACTGTATTAGCTGATGATCCATCTTTAACTGCCAGATTGCCCGAAGGCAGGG
GCAAAGATCCCCTGCGGATTATTGTAGACAGCATGTCCCGTACCCCTACCAGTGCAAAGATACTAACCCAGGAGTCTGCT
GCCCATACCATCATTGCAACGACCCAAGCGGCACCAGTGGAGCGTCGTGCAAGTTTAATGGCCGCTGGCGCAGAGGTTAT
AGTAGTACCGGGCGAAGGTCCAGGGGTTGACCTGAAAAAATTAATGGTTCTGCTGGGGGAAAAGCAAATATCCAGTGTGC
TCATTGAAGGCGGCGGTAAAATTAGCGGTTCTGCTTTGAATGCAGGTATTGTTGATAAAGTTGCTTGGTTTATTGCCCCT
AAAATCATCGGCGGGGACCTCGCTCCGGGACCTGTTCGGGGTGAAGGAATTCAATTCTTAAAAGATGCTACAAAACTATA
TAAGGTAACAGTGCAAAACTTAGGAGCAGATATTCTCATCACTGGTTATACCTCGAAAGGGGGGGACAAGATATCTTTAC
TGGAATTGTAG

Protein sequence :
MDQDRHYMNMALELAAKARGRTSPNPMVGAVLVKDGEVVGKGFHAKAGGAHAEVVALADAGDRAKGATVYVTLEPCCHHG
KTGPCTEALKKAGVKRVVAAMTDPNPLVAGKGLNILKDAGIEVVSGLLEEEAKELNEVFIKYITTKIPFIVLKAATSLDG
KIATASGESKWITGDTARNYGHRLRDAYDAILVGVNTVLADDPSLTARLPEGRGKDPLRIIVDSMSRTPTSAKILTQESA
AHTIIATTQAAPVERRASLMAAGAEVIVVPGEGPGVDLKKLMVLLGEKQISSVLIEGGGKISGSALNAGIVDKVAWFIAP
KIIGGDLAPGPVRGEGIQFLKDATKLYKVTVQNLGADILITGYTSKGGDKISLLEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-43 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-43 42