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Name : Dred_0015 (Dred_0015) Accession : YP_001111392.1 Strain : Desulfotomaculum reducens MI-1 Genome accession: NC_009253 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 23222 - 24496 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATTAAATTTGTACGTAGCAACCCAGAACTTGTATTAGAAGGACTTAAAAAGCGTGGTTCTGACATATCACT GGATGAATTCTTAAAGCTTGATAGTATGCGCCGAGAGAAATTAGTAGTGGCGGAACAATTAAAAAACACACGAAATGTAG TATCCCAGGAAATCGGTAAATTAAAAAAAGCTGGCCAAGATGCTGAGGAAAAAACCTTAGAGATGCGTAAAGTATCTCAA AAAATTAAAGATATGGATGATGAAATTAGAAACATAGAAGAAAAGCTTCAGGAGATTCTTTTATCTATTCCCAATATCCC CCATGAATCTGTTCCTGTGGGGAAAGATGAAAATGATAACGTGGAAATACGCCGCTGGGGTAAGCCCCGGGGCTTTGAAT TTGAGCCGAAACCTCACTGGGACTTAGGTGAGGATTTAAATATACTTGATTTTGAGCGGGGAGGCAAGGTAACTGGTGCT AGGTTCTCTTTCTATAAGGGTATGGGTGCCAGGTTAGAGCGTGCTCTGATAAACTTTATGTTGGATCTGCATACCAGGGA ACACGGCTATACCGAAATCTTCCCACCATTTATTGTCAATGGTGATAGCATGTTAGGTACCGGCCAACTCCCTAAATTTG CAGAAGATATGTTTAAACTGGAGGGATTGAATTATTATTTAATCCCTACCGCAGAGGTTCCTGTTACCAACCTATATCGG GATGAAATTTTGGCTGAAGAACAACTTCCTATATACCATTGCGCCTACAGTGCCTGCTTTCGAGCAGAGGCTGGAGCTGC CGGCAGGGATACCCGGGGGTTAATTAGGCAGCACCAGTTTAACAAAGTTGAATTGGTAAAGTTCTCTAAGCCAGAAGAAT CCTTTGATGAGTTAGAGCGTTTAACGGCAAATGCTGAAAAGATACTACAGGCCCTTGGTCTTCCTTATCGTGTAGTTTTA TTATCTACAGGAGATATGGGTTTCACATCTGCCAAAACCTATGATTTGGAGGTATGGTTACCCAGTTACAATGCCTACAA GGAAATTTCGTCCTGTAGTAACTTTTTAGATTTCCAGGCCAGACGAGCCAACATTAAATACCGTCCAACTCCCAAGTCTA AACCGGAATTTGTACATACCCTGAACGGCTCCGGCATTGCAGTAGGGAGAGCCTTATCGGCTATTTTAGAAAATTACCAA GAAGCCGATGGAAGTATTACAGTTCCTCCTGTACTTGTACCATATATGGGTGGTATTGAAAGAATAACCCTATAG Protein sequence : MLDIKFVRSNPELVLEGLKKRGSDISLDEFLKLDSMRREKLVVAEQLKNTRNVVSQEIGKLKKAGQDAEEKTLEMRKVSQ KIKDMDDEIRNIEEKLQEILLSIPNIPHESVPVGKDENDNVEIRRWGKPRGFEFEPKPHWDLGEDLNILDFERGGKVTGA RFSFYKGMGARLERALINFMLDLHTREHGYTEIFPPFIVNGDSMLGTGQLPKFAEDMFKLEGLNYYLIPTAEVPVTNLYR DEILAEEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFSKPEESFDELERLTANAEKILQALGLPYRVVL LSTGDMGFTSAKTYDLEVWLPSYNAYKEISSCSNFLDFQARRANIKYRPTPKSKPEFVHTLNGSGIAVGRALSAILENYQ EADGSITVPPVLVPYMGGIERITL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-130 | 64 |
