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Name : Dred_1599 (Dred_1599) Accession : YP_001112952.1 Strain : Desulfotomaculum reducens MI-1 Genome accession: NC_009253 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1737914 - 1740565 bp Length : 2652 bp Strand : - Note : KEGG: bha:BH3153 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2 DNA sequence : TTGTCCCTGGATACCATCATTATTATCGACGGCAACAGCCTAATTCATAGAGCTTTTCATGCCATCCCCCTGCTTTCCAA CAGTAAAGGGGTTATTACCAACGCTGTATATGGTTTCACTAATATGGTTTTAAAGGTTATCAAAGAGCAGGAGCCGGGTC TTGTTGCTGTTGCCTTTGATAAAGGCAAAACCACGTTCCGAAACCAGGAATATGCCGCATATAAAGGTACCCGTAAAGCT ACCCCCGATGAACTGCGCCCTCAATTTATCCTGGCCAGGGATATCTTGGGAGCGATGCGAATACCCTTCTTTGAATTGGA TGGCTTTGAGGCCGATGATTTAATCGGTACCATTGCTTGCCAGGCCGAGGCCACTGGACTCAACGTGTTAATTCTTACCG GTGATAGGGACGCTTTGCAACTGGTGTCTCCTAAAACCAAGGTTATGCTGACCCGTAAAGGGATCACAGAAATTGACTTA TTTGATGAAGGTAAGGTCTGGGACAAGTATGGTGTTACTCCAAGTCAGGTTGTGGATTTAAAAGGTCTGCAAGGGGACAC CTCGGATAATATCCCCGGCGTTGCCGGTATCGGAGAAAAAACCGCCAGTGTATTAATTAAAGAATACGGATCTGTGGAAG AAATCTTAAAAAACATTGATAAGCTCTCCCCCAGGCACCAGAAACTCTTACGAGGAAATGAAGAGATTGCACTTCTTTCA AAGAAACTGGCCACTATTATCCGGGACGTCCCCATGGAACTGGATTTATCTGAATGTTCCTGGCACGGACCCGATAACCA AAAGCTTCTGGAAATAGCCAAGGAGCTTGAATTTAAAACCCTGATTAAGCAACTTACCTCCGGTCAAAAATTTATAAAAC AAAGCCAAGACAGTGGAACATCTGCTGATTTGCCACCTTTAGAAACCTATCAAGTGGGTTATCTAAATGTAACGGATCAA GATGCCCTTGATGAACTTCTCATTGAGGTTAGTCGCCAGGGAAAAGTTGCCATTTATCTGGAAGGTTTGAGAAATCAAGG GATTGACACTGCCTATTTGGCAATGGAGGATCACGATATATACAGATTGGCTATCCAAAACAAAGACAGTGACTCGGACC CCTGCCTGACTGTGCTGAAGGCCATTTGTGAATGTGAGAGTGTCAAAAAATATTTTCACGATGCCAAGCAGGCCCTGTGG ATGTTGCACCACCATAGCATTGAACTGAAGGCATTGGCCGCCGACACCATGGTATCGGCCTACCTGCTAAATCCTACGGC CTCCAACTACGATATTAATGATGTGGCCTTAGAGCATCTGGGCATGGTATTGCCTGCGGAGGGCGAGACGGCAATGGCCA GCAGAGCTGAGGCTATCCGCCGGTTGGCCCAGAAACTATTTGAAAAGTTGGCTGAGCGTCAGGAAGACAGATTGCTAACA CAGGTGGAGTTGCCTCTGGTACGCATTCTGTCTGAGATGGAAATTGCCGGCGTAGCCGTTGATAAGCAGGGTTTACAGGA CATGTCTGTGGAACTTCAAACTGTAACAGAAACCCTGACGACCAAAATCCACGAACTGGCCGGTGAGAACTTTAACATTA ATTCCCCCAAACAATTGGGGCCCATTCTCTTTGAGAAGCTTAAGCTACCTGTACTTAAAAAAACCAAAACGGGGTATTCC ACCGACGCAGAGGTTCTGGAGAAACTGGCCGAGGAGCACGAGATAGTCGCCTTAATTCTGGAATATCGGCAAATGGCCAA ATTAAAATCCACCTATACCGATGGTCTTGCGGCCCTGGTGGACCCTCAAACAGGGCGGCTGCATTCAACCTTTCACCAAA CGGTTACCGCCACTGGACGGTTATCAAGTGCAGAACCAAATTTACAAAACATTCCCATCCGGTTGGAAACCGGCAGGAAA ATTCGCAAGGTGTTTATTCCCCGTCAAAGGGGTAATCTAATCCTGACAGCGGATTATTCTCAAATCGAATTGAGAGTGCT TGCCCATATGTCCCAAGACGAAAGCTTCTTGGATGCATTTCGGCAGGGTCAAGATATCCATACCCGAACTGCTTCGGAGG TTTTTGGCGTACCCATGGATCAGGTGACCTCGGAAATGCGAAGTCGGGCCAAGGCTGTCAACTTCGGTATCGTTTATGGC ATCAGTGACTTTGGACTAGCTCGGGATTTAAAGGTGTCACGCAAAGAGGCCCAGGGTTATATCGATCATTACTTTGCACG CTGCCCGGGGGTTCGGCAATATATTGACAGGGTTATCAAAGAGGCAAAAGAAACCGGCTATGTTAACACATTGTTAAACC GCCGCCGTTACCTGCCGGAATTATTCAGCAAAAACTTCAATATTCGTAACTTCGGGGAACGAGCTGCCATGAATACTCCT ATACAGGGCACTGCTGCGGATATCATAAAACTGGCCATGGTTAAAATCAGCCAGCAGCTCAAAGAGCAAAATCTTTCTTC TCAAATGGTCCTACAAGTTCATGACGAATTAATTTTTGATGCACCGGAAAACGAAATCGAGTCATTGATAATGCTGGTTC GCCAAAGTATGGAAAACGCATTACAATTAGACGTACCACTAGTGGTGGACATTAAGCTTGGTCCCAATTGGTACGAAGCT AAGCCCATTTAA Protein sequence : MSLDTIIIIDGNSLIHRAFHAIPLLSNSKGVITNAVYGFTNMVLKVIKEQEPGLVAVAFDKGKTTFRNQEYAAYKGTRKA TPDELRPQFILARDILGAMRIPFFELDGFEADDLIGTIACQAEATGLNVLILTGDRDALQLVSPKTKVMLTRKGITEIDL FDEGKVWDKYGVTPSQVVDLKGLQGDTSDNIPGVAGIGEKTASVLIKEYGSVEEILKNIDKLSPRHQKLLRGNEEIALLS KKLATIIRDVPMELDLSECSWHGPDNQKLLEIAKELEFKTLIKQLTSGQKFIKQSQDSGTSADLPPLETYQVGYLNVTDQ DALDELLIEVSRQGKVAIYLEGLRNQGIDTAYLAMEDHDIYRLAIQNKDSDSDPCLTVLKAICECESVKKYFHDAKQALW MLHHHSIELKALAADTMVSAYLLNPTASNYDINDVALEHLGMVLPAEGETAMASRAEAIRRLAQKLFEKLAERQEDRLLT QVELPLVRILSEMEIAGVAVDKQGLQDMSVELQTVTETLTTKIHELAGENFNINSPKQLGPILFEKLKLPVLKKTKTGYS TDAEVLEKLAEEHEIVALILEYRQMAKLKSTYTDGLAALVDPQTGRLHSTFHQTVTATGRLSSAEPNLQNIPIRLETGRK IRKVFIPRQRGNLILTADYSQIELRVLAHMSQDESFLDAFRQGQDIHTRTASEVFGVPMDQVTSEMRSRAKAVNFGIVYG ISDFGLARDLKVSRKEAQGYIDHYFARCPGVRQYIDRVIKEAKETGYVNTLLNRRRYLPELFSKNFNIRNFGERAAMNTP IQGTAADIIKLAMVKISQQLKEQNLSSQMVLQVHDELIFDAPENEIESLIMLVRQSMENALQLDVPLVVDIKLGPNWYEA KPI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-155 | 42 |
