Gene Information

Name : Dred_1191 (Dred_1191)
Accession : YP_001112550.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 1265474 - 1267426 bp
Length : 1953 bp
Strand : +
Note : PFAM: DNA-directed DNA polymerase; KEGG: lga:LGAS_1473 DNA polymerase I - 3'-5' exonuclease and polymerase domain

DNA sequence :
ATGACTATTCTTGGCATTGACATAGAAACATACAGCAGAGTTGACTTAACAAAAAGCGGAGTTTACGCATATGCGGAAGC
TGAAGACTTTGAAATATTACTTTTCGGATATGCTTTTGACGATGAGCCGGTGCAATTGATTGACTTAGCCAGTGGTGAGC
AACTACCGGATAATGTGCTAAACGCTTTAACTGATCCTGAAATAATAAAAACCGCTTTTAATGCTAACTTTGAACGGACC
TGTATTGCAAAGCATTTTAACCGTCCTATGCCACCGGAGCAATGGCGCTGCACTCATGTACACGCCCTGACCCTGGGCCT
TCCCGGTCACCTGGGCGACGTTGCCAAGGTGCTAGGCTTGAAGCAGCAAAAAGACACGGCAGGTAAGGCGCTAATCCGCT
ATTTCAGTATGCCTTGCAAACCAACCAAAGTTAACGGCCAGAGGACAAGGAACCTGCCCGAGCACGACCCGGATAGATGG
GCAAAATTCAAATCATATTGCAAGCAAGACGTTGCCGTTGAACGGGACATCAGAAAAACCTTAGAACGTTTTCCGGTAAT
AGAAGCTGAACATAAATTGTGGTGTCTGGACCAGCGTATTAATGATGGCGGGGTATTAGTTGACAGTCAGTTAGTTACAA
ATGCCATAGCTTGCGATACGCAATACCAGGATAAATTGATGGCAAAGGCCGCAAAGCTTACCGGGCTAGACAATCCTAAG
TCGGTAAGCCAATTAAAACAATGGCTGCTGAAAACAGATGGCTTGGAGGTAGAGAGTTTAAACAAAGAATCCGTTCCGGA
GCTATTAAAGCAAACTGAAAGTAGCACCGTCAAGCAAATGCTGGAGCTGCGACAAGAGATGGCTAAGACCAGCGTTAAAA
AATACTTAGCGATGGAACGCGCAAAAGGTAAAGATGGCCGAGTCCGAGGGCTGCTGCAGTTCTACGGGGCCAACCGGACG
GGCCGGTGGGCCGGGAGATTGGTCCAGGTGCAAAACCTTCCACGCAATTCGATTAAAGACCTGGACCAGGCCCGGCAGCT
GTTAAAAGCCGGAGATTATGAAATGCTGGAGCTGCTGTTTGAATCCGTACCTACTGTCCTATCTCAGTTAATCAGAACGG
CTTTTGTTCCGAAAGAGGGCCACCGGTTTATCGTGGCTGACTTCTCCGCTATTGAGGCCCGGGTCATTGCCTGGCTTGCA
GATGAGAAATGGCGCATGGACGTATTCCGTACCCACGGCAAAATTTACGAAGCATCAGCTTCAGCCATGTTCCACGTCCC
AATTGAAGAAATTACAAAAGGCAACCCGCTAAGACAAAAAGGGAAAGTATCAGAGCTGGCCCTCGGTTACCAAGGAGGCC
CTGGCGCATTGATAGCAATGGGAGCTTTAAAAGAAGGGCTAACAGAGGAGGAGCTTCCAGGGCTGGTTAAACTTTGGCGG
CAATCTAGTCCAAATATAGTTAAGTTTTGGTATGACACGGAGGCAGCTGCAATTAAAGCTGTTAAGGAAAAAACCACTGT
AGAGCTACACCACGGAATACATTTCATTTATGAGTCCGGCATCTTATTCATTCGCTTACCTTCCGGTAGGCGCTTGGCTT
ATATCAAGCCGAGGATACAAAACAATCCTCGGCTTGATAAGCCGGCATTAACCTATGAGGGCCAGGAGCAAGGTACAAAA
CAATGGGGCCGGCTCTACACTTACGGCGGGAAACTGGTTGAGAATATAGTCCAGGCTGTTGCCCGGGATTGTCTGGCGGA
AGCTCTGCTTAGGTTAGACGTTGCCGGCTACAAAACCGTTATGCACGTTCACGATGAGTCTGTTATGGAGATGCCACATG
GTGTAGGTAGCCTGGAGGATGCCTGCAGAATAATGGAACAACCGATACCCTGGGCACCCGGACTTCCGATGCGGGCCGAT
GGCTTTGAAAGCAACTATTACAAAAAAGATTAA

Protein sequence :
MTILGIDIETYSRVDLTKSGVYAYAEAEDFEILLFGYAFDDEPVQLIDLASGEQLPDNVLNALTDPEIIKTAFNANFERT
CIAKHFNRPMPPEQWRCTHVHALTLGLPGHLGDVAKVLGLKQQKDTAGKALIRYFSMPCKPTKVNGQRTRNLPEHDPDRW
AKFKSYCKQDVAVERDIRKTLERFPVIEAEHKLWCLDQRINDGGVLVDSQLVTNAIACDTQYQDKLMAKAAKLTGLDNPK
SVSQLKQWLLKTDGLEVESLNKESVPELLKQTESSTVKQMLELRQEMAKTSVKKYLAMERAKGKDGRVRGLLQFYGANRT
GRWAGRLVQVQNLPRNSIKDLDQARQLLKAGDYEMLELLFESVPTVLSQLIRTAFVPKEGHRFIVADFSAIEARVIAWLA
DEKWRMDVFRTHGKIYEASASAMFHVPIEEITKGNPLRQKGKVSELALGYQGGPGALIAMGALKEGLTEEELPGLVKLWR
QSSPNIVKFWYDTEAAAIKAVKEKTTVELHHGIHFIYESGILFIRLPSGRRLAYIKPRIQNNPRLDKPALTYEGQEQGTK
QWGRLYTYGGKLVENIVQAVARDCLAEALLRLDVAGYKTVMHVHDESVMEMPHGVGSLEDACRIMEQPIPWAPGLPMRAD
GFESNYYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 2e-156 54
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 1e-165 53
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 6e-166 53