Gene Information

Name : Dred_1099 (Dred_1099)
Accession : YP_001112459.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1170073 - 1170963 bp
Length : 891 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase

DNA sequence :
ATGGAGCGCTGGTTGGACGAATTTATCCATTACCTGGCAGTTGAGAGGGGTCTTGCCCAAAATACCTTAGCCTCCTACCG
AATAGACCTCAGCCAATATCTAGATCATTTAAAAAAACAGGGAGTTTCCTCTCTGACACAGGCAGATCGAAATCATATTT
TATCTCATTTGTACAAGTTGCAAAAGGATGGGAAGGCACCTGCAACAATTTCTCGACATTTGGCAGCGCTAAAACATTTC
TATCGTTTCCTGGTGTCAGATGGGGCAGTTTCCGAAGATTATACCGTTAGTTTAGAATCACCAAAATTGAAGCAAAGATT
ACCCCATGTGCTTTCCACAGAAGAAGTAGAAAATCTTTTATGCCAGCCTCAATTGTCGGACCCCGCAGGGTTAAGAGATA
AAGCAATGCTGGAATTAATTTATGCCACTGGGATTCGGGTCTCAGAAATGGTTTCTCTGAATCTCCCAGATGTTGAGCTG
GACATGGGTTATATAAAATGTTTTGGAAAAGGCGCCAAAGAACGAATTATACCCCTGGGTTCCGTTGCAATCAGGTACAT
CCGGGAATACTTGGAGAGATCCAGGGTCAAACTAACCAAGGGAAAGACCGAGCATCAGGCACTTTTTGTAAATGTACAAG
GTAAAAGGTTAACCCGCCAAGGGTTTTGGAAGATCATTAAAAAATATGCAAAAGAAGGAAGAATAAATAAGCCCATAACA
CCCCATACCCTAAGACACTCCTTTGCCACGCACCTTTTAGAAAACGGGGCGGATCTAAGGGCTGTACAGGAAATGTTGGG
ACATGCAGATATATCTACCACACAAATCTATACCCATTTAACAAAATTAAGACTTAGGGAAGTCTACACAAAGGCTCATC
CCAGAGCTTGA

Protein sequence :
MERWLDEFIHYLAVERGLAQNTLASYRIDLSQYLDHLKKQGVSSLTQADRNHILSHLYKLQKDGKAPATISRHLAALKHF
YRFLVSDGAVSEDYTVSLESPKLKQRLPHVLSTEEVENLLCQPQLSDPAGLRDKAMLELIYATGIRVSEMVSLNLPDVEL
DMGYIKCFGKGAKERIIPLGSVAIRYIREYLERSRVKLTKGKTEHQALFVNVQGKRLTRQGFWKIIKKYAKEGRINKPIT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLTKLRLREVYTKAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-55 43