|
Name : Dred_1022 (Dred_1022) Accession : YP_001112382.1 Strain : Desulfotomaculum reducens MI-1 Genome accession: NC_009253 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1094473 - 1096137 bp Length : 1665 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: mta:Moth_1554 type II secretion system protein E DNA sequence : ATGCTAACCGTTGCACCGAAAAGTTTAATAGGCAATATTCTTCTTGAAAAGGGTGCCATAAGTCAACAGCAGCTAAGGGA AGCCCTAAATAACCATCGTCAGACCGATCAACCTTTGGGACAAGTACTTGTTGATTTGGGTTATGTCACTAAGAAACAAG TATCCCAATATTTGGATTACCAGGAGCAAATGGAAGAAGAAGTCATTCATATACAGGAAATTGATAAAGCCCTTCTAAAG CTCTTCTCGGAACAGATCCTTCGCAGATATAAGATATTTCCTCTTTTTAAAAAGGGCAATAAACTAACTGTTGCTATGGC GGAACCAGCCAATGTGATTGCCATTGATGATTTAAAAGTGATTTCCAATCTGGATATTGTGCCGGTGGAGGTTCAGGAGC AGATCATTGAATTAGCCATAGACCTCTACTACGACATTACAAAAAGGGAAGTAAACGATAAAGAACAAAGATTAGTCATT ACGGATGAAGAAGAAGTCCCCATTATTCAGTTAGTTTACCAAATCATTGACAGGGCCATTGACCAAGGGGCCAGTGACAT TCATATTGAACCTCAGGAAAAGAGAGTGAGGATCCGATACCGTATTGATGGGATGCTGATACTGGGCATGGAATTAGCAC CTACACTAGATAAAGCCATCATTTCCAGAATAAAGATCATGTCGCAACTGAATATTGCCGAAAAAAGAGTACCCCAGGAT GGCCGCATCCAGTATGGGAAGCAAAGCCGGAATTTTGATCTGCGGGTTTCCACTATGCCCACAGTCTATGGGGAAAAGGC AGTTATTCGGATTCTAAATCCCGAAAGCATAAAAAAATACCAGCTTGCACAATTGGGATTCTCCGCCTATAATTTGAAGA GCTTTCAGAAATGTCTTAGGGCCACCAGTGGGATGGTACTAATTACCGGCCCCACAGGTTGTGGTAAAACAACAACCCTA TACGCTATTCTAAATGAACTAAACCTTGAGGACAGAAATTTTAGTACCATTGAAGACCCGGTAGAATACCGTCTGGAAGG AATTAATCAGACCCAGGTTAATACCAAGACGGGCATGACCTTTGCCGTAGGGTTACGTGCTCTTTTGCGGCAGGATCCAG ATATCATTATGGTGGGTGAAATTCGAGACCGGGAAACTGCTGAAATTGCTGTAACTGCAGCCGGTACAGGACACTTGGTA TTTTCTACCTTGCATACTAACGATGCACTGGGTGCACTGGACAGGCTTATTCACATGGGGCTTGAGATTTTTCAAGTGGC TTCCTCTGTATTGGTGGTTGTAGCACAGCGCCTGGTTCGCAAGCTCTGTCCCTACTGCAAGGAGGGCTACTTAGTTGAAA CCAAGTCTCCTGAATATGCTTTTTTACAAAGCACTCCTTGGCAGGATCATATTTTTTATAAAGCAAAAGGTTGTGTGCAT TGCAACTTTATTGGCTATCGCGGGCGCATGGCCATACAAGAGGTGTTGCAAGTTAATGGTAATATCCGTAAACTGCTGGT AGAAAGGGCTCCTAGCGGTGAATTAAAGAAAGCAGCCCTCCAGGGGGGCATGACAACCCTTAAAACTGATGGTATAGAGA AGGCCCTTCAGGGCTTAACCAGTATCCCAGAAGTTATGCGGGTGGCCTATTCCGATGAGGAATAG Protein sequence : MLTVAPKSLIGNILLEKGAISQQQLREALNNHRQTDQPLGQVLVDLGYVTKKQVSQYLDYQEQMEEEVIHIQEIDKALLK LFSEQILRRYKIFPLFKKGNKLTVAMAEPANVIAIDDLKVISNLDIVPVEVQEQIIELAIDLYYDITKREVNDKEQRLVI TDEEEVPIIQLVYQIIDRAIDQGASDIHIEPQEKRVRIRYRIDGMLILGMELAPTLDKAIISRIKIMSQLNIAEKRVPQD GRIQYGKQSRNFDLRVSTMPTVYGEKAVIRILNPESIKKYQLAQLGFSAYNLKSFQKCLRATSGMVLITGPTGCGKTTTL YAILNELNLEDRNFSTIEDPVEYRLEGINQTQVNTKTGMTFAVGLRALLRQDPDIIMVGEIRDRETAEIAVTAAGTGHLV FSTLHTNDALGALDRLIHMGLEIFQVASSVLVVVAQRLVRKLCPYCKEGYLVETKSPEYAFLQSTPWQDHIFYKAKGCVH CNFIGYRGRMAIQEVLQVNGNIRKLLVERAPSGELKKAALQGGMTTLKTDGIEKALQGLTSIPEVMRVAYSDEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-75 | 47 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-75 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG0182 | Protein | 8e-81 | 49 |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG2048 | Protein | 4e-76 | 48 |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG1876 | Protein | 5e-76 | 48 |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG2426 | Protein | 4e-69 | 44 |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG0112 | Protein | 6e-77 | 42 |
| Dred_1022 | YP_001112382.1 | type II secretion system protein E | VFG1880 | Protein | 2e-73 | 42 |
