Gene Information

Name : Dred_0980 (Dred_0980)
Accession : YP_001112340.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1037881 - 1038291 bp
Length : 411 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mta:Moth_0129 single-strand binding protein

DNA sequence :
TTGTTAAATAAAGTTATTTTAATTGGTCGGTTAACAAGAGATCCTGAGTTACGGTATACCACTAATGGTATTGCTGTAGC
TAAATTAAATCTGGCAGTGGAGCGTCCCCAGTTTAACCGGGAGAGAGAAAAGGAAACGGATTTTATTGATATCGTTGTTT
GGCAGAGACTGGCCGAGATCTGTGCCAATAATTTGGGTAAAGGTCGCTTGGTGGCTGTTGATGGTCGTCTGCAAGTTCGT
TCCTATGATGATAATCAGGGAATACGCAGGAAAGCAGCTGAGGTAGTGGCTGAAAATGTCAAGTTTCTGGATTGGCCCAA
GGATAGGCCTAATCATCAGGATAGTGACAATAATAAAGGTGATGGGTTCGGTAGTGAAATAAGCTTCAATGGTGATGATA
TACCGTTCTAA

Protein sequence :
MLNKVILIGRLTRDPELRYTTNGIAVAKLNLAVERPQFNREREKETDFIDIVVWQRLAEICANNLGKGRLVAVDGRLQVR
SYDDNQGIRRKAAEVVAENVKFLDWPKDRPNHQDSDNNKGDGFGSEISFNGDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-22 54
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-22 53
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-22 51
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-21 51
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 9e-20 50
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-22 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 50
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 9e-23 49
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 9e-23 49
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-22 48
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-19 42
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-20 41
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-20 41