Gene Information

Name : Bcep1808_7234 (Bcep1808_7234)
Accession : YP_001109894.1
Strain :
Genome accession: NC_009227
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 201816 - 202838 bp
Length : 1023 bp
Strand : -
Note : PFAM: regulatory protein, LacI; Integrase, catalytic region; Resolvase helix-turn-helix domain protein; KEGG: pst:PSPTO_B0040 ISPsy4, transposase

DNA sequence :
ATGTTGACCCAGGAGCAATCATTGGAGATTCGAGTACTGGCCCGTCAGGGCCACGGCATCAAGGCGATCGCGCGAGAGTT
GGGCGTGTCGCGCAACACAGTCAGGCGATACCTGCGCGGTGAGGCGACGCCTCCCAGCTACGGCCCGAGGGCTGCGCGGC
CACGCAAGCTGGACCCGTACACGCAGTACCTGCGAGATCGCATCGAGGCGGCCCATCCGCACTGGATTCCGGCGACGGTT
CTTCTGCGCGAGATCCGTGAACACGGTTACACGGGCGGCATTAGTCAGTTGAAGGCGTTTCTGGCGCCGTTGAAGGTTCG
TCCCGCCGAGCCTGTGGTGCGGTTCGAGACCCCACCCGGCAAGCAGATGCAGGCCGACTTCACGACGATACGGCGAGGCC
GCCATCCGCTGAAGGCCTTCGTCGCCACGCTGGGCTACAGCCGCGCCACCTTCGTGCTATTTTCCGAGAGAGAAGACAGC
CCGGCTTGGCTACGCGGCTTACGTGAAGCATTTGTTTATTTCGGCGGCGTGCCCGAAGAGGTTCTTTTCGACAACGCCGG
TACGGTCGTCACCGAACGCGATGCATACGGCCAGGGTCAACATCGCTGGCACCCAGCACTTGCCTCGTTGGCCGATGAGT
TTGGCTTTCGTCCCAGGCTGTGTCGACCCTATCGAGCCAGAACCAAGGGCAAGGTCGAACGGTTCAACGGCTATCTGAAG
AGCAGCTTCGTCACCCCGTTGGCTGCGACGCTGAAGACGGCCGGCCTGCTCCTCGATGTCGATACGGCCAATGCCCATAT
CGGCCGCTGGTTGGCAGAGGTGGCGCAGCAACGCATCCACGGCACGACGGGTGAGAAGCCCGAAGTGCGCCTTGCTCACG
AGCGACATAGTTTGATGAGCCTGCCCAGGGCGTTCGCTACGCCGCCGGCCGTTACCGTAAAAACTGCAGATATGGTGATT
CCGCACGAGAGCCTGCAGCACCCGCTGTCGGTGTACGGCGCCTTACTGGAGCATGCCGCATGA

Protein sequence :
MLTQEQSLEIRVLARQGHGIKAIARELGVSRNTVRRYLRGEATPPSYGPRAARPRKLDPYTQYLRDRIEAAHPHWIPATV
LLREIREHGYTGGISQLKAFLAPLKVRPAEPVVRFETPPGKQMQADFTTIRRGRHPLKAFVATLGYSRATFVLFSEREDS
PAWLRGLREAFVYFGGVPEEVLFDNAGTVVTERDAYGQGQHRWHPALASLADEFGFRPRLCRPYRARTKGKVERFNGYLK
SSFVTPLAATLKTAGLLLDVDTANAHIGRWLAEVAQQRIHGTTGEKPEVRLAHERHSLMSLPRAFATPPAVTVKTADMVI
PHESLQHPLSVYGALLEHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api83 CAF28557.1 transposase Not tested YAPI Protein 7e-71 50
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 9e-71 50
y2411 NP_669718.1 transposase Not tested HPI Protein 9e-71 50
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 9e-71 50
unnamed CAA21403.1 - Not tested HPI Protein 9e-71 50
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 7e-71 50
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-71 49
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-71 49
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-71 49
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-71 49
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-71 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_7234 YP_001109894.1 integrase catalytic subunit VFG1514 Protein 1e-71 49
Bcep1808_7234 YP_001109894.1 integrase catalytic subunit VFG1626 Protein 1e-71 49
Bcep1808_7234 YP_001109894.1 integrase catalytic subunit VFG1607 Protein 1e-71 49
Bcep1808_7234 YP_001109894.1 integrase catalytic subunit VFG1461 Protein 1e-71 49