Gene Information

Name : SACE_6028 (SACE_6028)
Accession : YP_001108127.1
Strain : Saccharopolyspora erythraea NRRL 2338
Genome accession: NC_009142
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 6765422 - 6766180 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGCCGGGATCAGCGCGCACGGCGTCACCGTCCACTACGGCGAGACGCTGGCGCTGGACGACGTCACCGTGGACGT
GCCCGCCGGGCAGGTCTGCGGACTGCTCGGCATGAACGGATCCGGAAAGTCGACGCTGTTCAAGGCCCTGATGGGCCTGG
TGCGCCCGGACCACGGCACGATCCGGCTGCTCGGGCGCTCGCCCAGGCAGGCCCGCCGGGAGGGCCTGATCGCCTACGTC
CCGCAGTCCGAGGCCGTCGACTGGACCTTCCCCGTGACCGTCGCCGACGTCGTGATGATGGGCCGCTACGGCCACCTCGG
CCTCACCCGCAGGCCCCGCGCGGCCGACCGGGCCGCGGTCGCGGCGGCTCTGGAGCGGGTCGGTCTCACCGACCTGGCGG
GCAATCCGATCGGCGCGCTGTCGGGCGGGCAGCGCAAGCGGGCCTTCGTGGCCAGGGGGATCGCCCAGGACGCCCGGCTG
CTGTTCCTCGACGAGCCGTTCGCCGGGGTCGACAAGCGGTCGGAGGCGACCATCGCCGAGCTGCTGCGGGCGCTGCGCGG
CGAGGGGCGCACGATCATGATCTCCACCCACGACCTGGCCAGCGTGCCGGCGTTGTGCGACGAGGCCGTCCTGATCCAGC
AGCGCGTGATCGCGCACGGCCCGCTCGACGAGGTGCTCGCGCCGGAGACCCTCGCACGCACGTTCGGCGCCGAGGTGGCC
GCCGCCAGGCCGGGCGACGAGGCTGGAGGTGTGCGGTGA

Protein sequence : 
MSAGISAHGVTVHYGETLALDDVTVDVPAGQVCGLLGMNGSGKSTLFKALMGLVRPDHGTIRLLGRSPRQARREGLIAYV
PQSEAVDWTFPVTVADVVMMGRYGHLGLTRRPRAADRAAVAAALERVGLTDLAGNPIGALSGGQRKRAFVARGIAQDARL
LFLDEPFAGVDKRSEATIAELLRALRGEGRTIMISTHDLASVPALCDEAVLIQQRVIAHGPLDEVLAPETLARTFGAEVA
AARPGDEAGGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-53 54
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-53 54
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-53 53
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-54 53
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-54 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACE_6028 YP_001108127.1 iron ABC transporter ATP-binding protein BAC0350 Protein 2e-54 53
SACE_6028 YP_001108127.1 iron ABC transporter ATP-binding protein BAC0440 Protein 2e-56 50
SACE_6028 YP_001108127.1 iron ABC transporter ATP-binding protein BAC0400 Protein 6e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACE_6028 YP_001108127.1 iron ABC transporter ATP-binding protein VFG0526 Protein 2e-54 53