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Name : clpC (SACE_0414) Accession : YP_001102688.1 Strain : Saccharopolyspora erythraea NRRL 2338 Genome accession: NC_009142 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 463959 - 466520 bp Length : 2562 bp Strand : + Note : - DNA sequence : ATGTTCGAGAGGTTCACCGACCGCGCGAGGCGGGTGGTCGTCCTGGCCCAGGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTCCTGGGCTTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCGCTGGAGTCGCTGGGTA TCGCGCTTGAGGGCGTGCGCCAGCAGGTCGAGGAGATCATCGGCCAGGGTCAGCAGGCTCCGAGCGGTCACATCCCGTTC ACCCCGCGGGCCAAGAAGGTGCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTGGGGCACAACTACATCGGGACCGAGCA CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTGGCCGCGCAGGTGCTGGTCAAGCTCGGCGCGGACCTCAACCGGG TTCGCCAGCAGGTGCTGCAGCTGCTGTCGGGTTACCAGGGCAAGGAGCCGGCGGAGGCCGGCGGCCGCGGCGAGGGAACC CCGTCGTCGTCGCTGGTGCTGGACCAGTTCGGCCGCAACCTGACGCAGAGCGCCCGCGAGTCCAAGCTCGACCCGGTCAT CGGTCGCGAGAAGGAGATCGAGCGGATCATGCAGGTCCTCTCGCGGCGCACCAAGAACAACCCGGTGCTCATCGGCGAGG CGGGCGTCGGCAAGACCGCCGTGGTCGAGGGCCTGGCGCAGAAGGTCGTCAAGGGCGAGGTGCCCGAGACGCTGAAGGAC AAGCAGCTCTACACCCTCGACCTGGGTTCGCTGGTCGCGGGTTCGCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA GGTGCTCAAGGAGATCAAGACCCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACCCTGGTGGGTGCGGGTGCCG CCGAGGGCGCCATCGACGCGGCGAGCATCCTCAAGCCGATGCTGGCCCGCGGCGAGCTCCAGACGATCGGTGCGACCACG CTGGAGGAGTACCGCAAGTACGTCGAGAAGGACCCGGCGCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGGCGAGCCCTC GCTGGAACACACCATCGAGATCCTCAAGGGCCTGCGCGACCGGTACGAGGCGCACCACCGGGTGTCCATCACCGACGGCG CGCTGGTCTCGGCCGCGACGCTGGCCGACCGCTACATCAACGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC GAGGCCGGCGCCCGGATGCGCATCCGCCGCATGACCGCTCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGACGT GCGCCGGGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGCGGGCCGCCCGCCTGCGCGACGAGGAGAAGCAGCTCC TCGGGCAGAAGGACGAGCGCGAGAAGCAGTGGAAGGCAGGCGACCTCGACGTCGTCGCCGAGGTGGATGACGAGCAGATC GCCGAGGTGCTGGCGAACTGGACGGGGATTCCGGTGTTCAAGCTCACCGAGGAGGAGACCACGCGTCTGCTCCGCATGGA GGACGAGCTGCACAAGCGGATCATCGGCCAGGACGACGCGGTCAAGGCGGTCTCGCAGGCGATCCGGCGTACCCGTGCGG GGTTGAAGGACCCCAAGCGCCCGTCGGGGTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG GCGCTGGCGGAGTTCCTGTTCGGCGACGACGACGCGCTGGTGCAGATCGACATGGGCGAGTTCCACGACCGCTACACCGC CTCGCGGCTGTTCGGTGCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGTCGCAAGC CGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACACGCTGTTGCAGGTGTTGGAGGAC GGGCGTCTGACCGATGGTCAGGGGCGCACGGTGGACTTCAAGAACACGGTGCTGATCTTCACCTCGAACCTGGGTACCCA GGACATCTCCAAGGCCGTGGGGCTGGGCTTCTCGGCCGGGACCGACTCCGAGTCCAACTACGAGCGGATGAAGAGCAAGG TCAACGAGGAGATGAAGAAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGACGTGATCGTGTTCCACCAGCTCACC GAGGCCGAGATCATCCAGATGGTCGACCTGCTCGGTGCGAGGGTGGAAAAGGCCCTCAAGGGCAAGGACATGTCGCTGGA GCTGACCACGCTGGCCAAGAAGCTGCTGGCCAAGCGCGGGTTCGACCCGGTGCTGGGGGCCCGGCCGTTGCGCCGGACCA TCCAGCGCGAGATCGAGGACAGGCTCTCGGAGAAGATCCTGTTCGGCGAGATCGAGCCCGGCCAGATCGTCATCGTCGAC GTCGAGGGCTGGGACGGCGAGGGCTCCGACGACAAGGCCCACTTCACCTTCCGCGGTGAGACCAAGCCGTCGCTGGTGCC CGACGCCCCACCGGTCGACCTCGCCGGCTCCACCGGCTCGTCGACCGACGACAAGTCGGAAGGCACCTCCGACCAGGAGT GA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLLSGYQGKEPAEAGGRGEGT PSSSLVLDQFGRNLTQSARESKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQKVVKGEVPETLKD KQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT LEEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALVSAATLADRYINDRFLPDKAIDLID EAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAARLRDEEKQLLGQKDEREKQWKAGDLDVVAEVDDEQI AEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQDDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSK ALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLED GRLTDGQGRTVDFKNTVLIFTSNLGTQDISKAVGLGFSAGTDSESNYERMKSKVNEEMKKHFRPEFLNRIDDVIVFHQLT EAEIIQMVDLLGARVEKALKGKDMSLELTTLAKKLLAKRGFDPVLGARPLRRTIQREIEDRLSEKILFGEIEPGQIVIVD VEGWDGEGSDDKAHFTFRGETKPSLVPDAPPVDLAGSTGSSTDDKSEGTSDQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 80 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-95 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001102688.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 61 |
| clpC | YP_001102688.1 | ATP-dependent Clp protease | VFG0080 | Protein | 1e-142 | 48 |
