Gene Information

Name : fepD (SACE_0411)
Accession : YP_001102685.1
Strain : Saccharopolyspora erythraea NRRL 2338
Genome accession: NC_009142
Putative virulence/resistance : Virulence
Product : ferrichrome transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 460677 - 461747 bp
Length : 1071 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTCGCAGCGCGATCGTGGGCGACCCGCCCGAGGCCGCACGCGAGCCCGCTGCGGGCGGGCGGCTGGCGGCCCGCCG
CCGCAGGCGGCTGGTCGGCATCGGAGTGCTCGCCGTGCTCCTGCTGCTGAGCTGCCTGCTCAGCGTGTTGCTCGGTGCCA
AGCCCATGTCCCTCGAAGCGGTCTGGAGCGCGCTGTTCGCGCCCACCGGTACCGAGAACGACCTGATCGTCCGCGAGTTG
CGGGTGCCGCGCACGATCGTCGGAGTGCTGGCCGGGGTCGCGCTCGGGCTCGCGGGCGCGCTCATGCAGGGCCACACCCG
CAACCCCATCGCCGACCCCGGCATCCTCGGCATCACCCACGGCGCGGCGCTGGGCATCGTGCTCTCGGTCTACGTCTTCG
GCATCACCAGCCTGTTCGGCTTCATCTGGTTCGGCTTCGGCGGCGCGCTGCTGGGCGCGCTCGCGGTGTTCGCCATCGGT
TCCATCGGCCGCGGCGGACCGACACCGGTCACGCTCGCGCTGGCCGGCATGGCCATCGGCTACCTGCTGCAGGCCATCAC
CTCGGCGCTGGTGCTGGTCGACCAGCAGAGCCTGGAGACCTACCGGTTCTGGAAGGTCGGCTCGATCGCGGTCACCGACA
CCTCGGTGATTTGGCAGGTGCTGCCGTTCCTGGCGGTCGGGGTGGTGGTCGCGCTGGCCAACGCCTCCGGCCTCAACGCG
CTCTCGCTCGGCGAGGACGTCGCCCGCTCGCTCGGCCACCGCGTGCAGTGGTCCCGGCGGCTGGGCATCGCGGCCATCGC
GGTACTGGTCGGCGGCGCGGTCGCCATCTGCGGGCCGATCGGCTTCGTCGGCCTGATCGTGCCGCACGTGGCCCGCTTCT
TCACCGGCGCCGACTACCGCTGGCTGCTGCCCTTCGCGGCGCTGATGGGCGCGTCGGTGGTGCTGCTGGCCGACGTGCTC
GGGCGGCTGGTCGCCCGGCCCGCCGAGATTCAGGTGGGCGTGATGCTCGCGGTCGTCGGCGCCCCCTTCTTCATCGGACT
GGTGCGGCGCAGGAAGTTGGTGCGGTTGTGA

Protein sequence : 
MSRSAIVGDPPEAAREPAAGGRLAARRRRRLVGIGVLAVLLLLSCLLSVLLGAKPMSLEAVWSALFAPTGTENDLIVREL
RVPRTIVGVLAGVALGLAGALMQGHTRNPIADPGILGITHGAALGIVLSVYVFGITSLFGFIWFGFGGALLGALAVFAIG
SIGRGGPTPVTLALAGMAIGYLLQAITSALVLVDQQSLETYRFWKVGSIAVTDTSVIWQVLPFLAVGVVVALANASGLNA
LSLGEDVARSLGHRVQWSRRLGIAAIAVLVGGAVAICGPIGFVGLIVPHVARFFTGADYRWLLPFAALMGASVVLLADVL
GRLVARPAEIQVGVMLAVVGAPFFIGLVRRRKLVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-29 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_001102685.1 ferrichrome transport system permease VFG0926 Protein 1e-24 43