Gene Information

Name : SACE_3568 (SACE_3568)
Accession : YP_001105767.1
Strain : Saccharopolyspora erythraea NRRL 2338
Genome accession: NC_009142
Putative virulence/resistance : Virulence
Product : ABC-transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 3930906 - 3931616 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
ATGACGGGTGACTCGCGGACCGACCGGTCCCCGGGTACCGAGATCCTGCTGACCGCTTCCGACCTGCACCTGTCGTTCGG
GGCCACTCCGGCGCTGCGCGGTGCGGGGCTGGCGGTGACCGCAGGCGAGATGGTCGCGGTGATGGGCTCGTCCGGCTCGG
GGAAGTCCACGCTCCTGCACTGCCTGGCCGGGATCCTGGTGCCCGAGAAGGGCGAGGTGCGCTACCGCGGCCGCGACCTG
GCGCGGGCCTCCGACGAGGAGCGCAGCGAGCTGCGCCGCGGCGACTTCGGATTCGTCTTCCAGTTCGGCCAGCTCGTACC
CGAGCTCACGGTCGCCGAGAACGTGGCACTGCCGCTGCGCCTGTCCGGCGTCGGCCGCCGCCGCGCCGAGCGGCAGGCCG
CGGAGTGGCTGGAGAAGCTGGAGATCGCCGCGATCGCCGGCCAGCGGCCGGGAGAGGTCTCCGGCGGTCAGGGCCAGCGG
GCCGCGCTGGCGCGCGCCCTGGTCGGCAACCCCTCGGTGATCTTCGCCGACGAGCCGACCGGTGCACTGGACTCCGAGGG
CGGTGAGCACGTCATGCGGCTGCTCTCCGACGCCGCCCGCAACACCGGCGCCGCGGTCGTCCTGGTCACCCACGAACCCC
GGGTCGCCGCCTACGCCGACGGCGAGGTCGTCATCCGCGACGGCCGGACCAAGGCGCGGGAGCTGGTCTGA

Protein sequence : 
MTGDSRTDRSPGTEILLTASDLHLSFGATPALRGAGLAVTAGEMVAVMGSSGSGKSTLLHCLAGILVPEKGEVRYRGRDL
ARASDEERSELRRGDFGFVFQFGQLVPELTVAENVALPLRLSGVGRRRAERQAAEWLEKLEIAAIAGQRPGEVSGGQGQR
AALARALVGNPSVIFADEPTGALDSEGGEHVMRLLSDAARNTGAAVVLVTHEPRVAAYADGEVVIRDGRTKARELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACE_3568 YP_001105767.1 ABC-transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-24 47
SACE_3568 YP_001105767.1 ABC-transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACE_3568 YP_001105767.1 ABC-transporter ATP-binding protein VFG2059 Protein 9e-13 43