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Name : clpA (SACE_3385) Accession : YP_001105585.1 Strain : Saccharopolyspora erythraea NRRL 2338 Genome accession: NC_009142 Putative virulence/resistance : Virulence Product : Clp protease ATP binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3736299 - 3738815 bp Length : 2517 bp Strand : + Note : - DNA sequence : ATGGCGACGTTCTTCGGACCGGGCGGATTCGGACAGGGCCCGTTCGACGAGTACCTCGCCCGTTTCTTCGGGCCTGGCGC CGGCGCAGGCGCCGCCCGTCGCGTCGACATCACCGAACTGATGACCCAGAAGACCCAGGAGCTGCTCGCCGGGGCCGCCG ACTACGCCCGTGGTCTGGGGCACGACGACCTCGACGCGCTGCACGTGCTGTGGGCGGCCACCAAGGAGGCCACGACCCGC GAGATGCTCGAGGGCGTCCAGGTCGACCCGGACACCTTCGCCGAGACCGTGCAGCGCCAGTTGCCCGCCGCGCGGGAGGC GGCCAGCCGTGCGCCCGCGCTGACCCCGGCGGGCCGCAAGGTCCTGGTGGACGCCTACCAGGTGGCCCGTGCGCTGGGCT CGACCTACATCGGGCCGGAGCACGTGCTGCTGGCGATGTCGGCCAGCCCGGACTCGGAGGCGGGCAGGCTGCTGGCCTCG GCGGGCGCGACCCCGGAGGAGTTCCGGGTGTCGGCGGGCGGTGCCCGGCGGTCGGAGGCCGCGACCGGGCAGGCCACCGC CGAGCGCGACAGCGGCACCCCGACGCTGGACAAGTACGGCCAGGACCTCACCGCCCGCGCCCGCGACGGTGAGCTCGACC CGGTCGTCGGCCGCGCCGACGAGATCGAGCAGACCATCGAGGTGCTGTCGCGGCGGACCAAGAACAACCCGGTCCTCGTC GGCGAGGCCGGTGTCGGCAAGACCGCCATCGTCGAGGGGATCGCCCAGCGCATCGCCGACGGGCAGGTCCCGCACGTGCT GACCGGCAAGCGCATCGTGCAGCTCGACCTGTCGAGCATGCTGGCGGGCACCCGCTACCGCGGTGACTTCGAGGAACGGA TGACCAAGGTCATCGACGAGATCAGCGCCAACAGCGGCGAGGTCATCGTGTTCATCGACGAGCTGCACACGCTGGTCGGT GCGGGCGGCGCCGAGGGCGCGGTCGACGCGGGCAACATGCTCAAGCCCCGGCTCGCCCGCGGTGAGCTGCACGTCGTGGG CGCCACGACGCTCGACGAGTACCGCAAGAACATCGAGAAGGACGCGGCGCTGGAACGCCGCTTCCAGCCGGTGCAGGTGC CCGAGCCGAGCGTCGAGGACACCATCGAGGTGCTCGACCGGCTGCGGGACCGCTACGCCGAACACCACAGGGTCCGCTAC ACCGACGAGGCGGTCGCCGCCGCGGCCAGGCTGTCGGACCGCTACATCGCCGACCGCTTCCTGCCGGACAAGGCCATCGA CCTGCTCGACCAGGCCGGCGCCCGCAAGCGGCTCAGCGTCGTGGGCCCGTCGGCCGACGAGCTGGAGCAGCGCATCCAGC GGCTGGAGCGGGAGAAGGACCGTTCGGTGGCCGACGAGGACTACGAGCGGGCCTCGGCGCTGCGCGACGAGATCGGCGTG GCGCAGGCGGAACTGGAAGCCAACCGCGATGCCGGCGTGCCGGAGGTGACCGAGAGCGACATCGCCGAGGTCGTCTCGCG GGCGACGGGCGTGCCGGTCAGCCGCCTGACCGAGCAGGAGCGCACCCGGCTGCGAAACCTGGAGGGCGAGCTGCACCGCC GCGTCATCGGCCAGGACGACGCGGTGCGGGCGCTGGCCCGCGCGGTGCGGCGTTCGCGCAGCGGCGTCGGCAACGCCAAC CGCCCGGTGGGCAGCTTCCTGTTCCTGGGCCCGACCGGCGTCGGCAAGACCGAGCTGGCCAAGGCGCTGGCCGAGACGCT GTTCGGCGACGAGGACCGGATGATCCGGCTCGACATGAGCGAGTTCCAGGAGCGGCACAACGCCGCGCGCCTGATCGGTG CTCCTCCCGGCTACGTCGGCTACGGCGAGGCGGGCGAGCTGACCGAGGCGGTGCGGCGCAGGCCGTACTCGGTGGTGCTG CTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCAACACGCTGCTGCAGGTGCTGGAGGACGGCAGGCTCACCGACGG CCAAGGCCGCACGGTCGACTTCACCAACACCGTGGTGATCATGACCAGCAACCTGGGCTCGGAGGTCATCTCCAGCAAGT CCGGCGGGCTGGGCTTCTCGGCCGCGCAGGACGAGGCCGACGAGTCGCTGCACGACCGGCTGATGCCGCGGCTGAAGGAG GCGTTCCGGCCCGAGTTCCTGAACCGGATCGACGAGGTCGTGGTGTTCCGCAAGCTGACCGCGGAGCAGCTGCACGACAT CGCCGACCTGCTGCTGGACGGCACCCGCAAGCGGCTGGCCGCGATGGAGATCGGCATCGGGTTCGACGACGCGGCCGTCG ACCTCATCGCCGAGCGCGGCCACCAGCCGGAGTTCGGCGCCCGGCCGCTGCGCCGGACGATCGAGCGCGACGTCGACGAC CGGATCGCCGACCTGGTGCTCGACGGCGAGCTGGAGGCCGGCAGCGCCGTCCACGTCGGGGTCCGCGACGGGCAGCTCAC CTTCGAGGTGACCCAGCGGACGCCCGAGTCGGTCTGA Protein sequence : MATFFGPGGFGQGPFDEYLARFFGPGAGAGAARRVDITELMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATTR EMLEGVQVDPDTFAETVQRQLPAAREAASRAPALTPAGRKVLVDAYQVARALGSTYIGPEHVLLAMSASPDSEAGRLLAS AGATPEEFRVSAGGARRSEAATGQATAERDSGTPTLDKYGQDLTARARDGELDPVVGRADEIEQTIEVLSRRTKNNPVLV GEAGVGKTAIVEGIAQRIADGQVPHVLTGKRIVQLDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVG AGGAEGAVDAGNMLKPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEVLDRLRDRYAEHHRVRY TDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGPSADELEQRIQRLEREKDRSVADEDYERASALRDEIGV AQAELEANRDAGVPEVTESDIAEVVSRATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVGNAN RPVGSFLFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEAGELTEAVRRRPYSVVL LDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSNLGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKE AFRPEFLNRIDEVVVFRKLTAEQLHDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDD RIADLVLDGELEAGSAVHVGVRDGQLTFEVTQRTPESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-173 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_001105585.1 | Clp protease ATP binding subunit | VFG0079 | Protein | 1e-180 | 50 |
| clpA | YP_001105585.1 | Clp protease ATP binding subunit | VFG0080 | Protein | 4e-144 | 50 |
