Gene Information

Name : tpase1 (SACE_2604)
Accession : YP_001104819.1
Strain : Saccharopolyspora erythraea NRRL 2338
Genome accession: NC_009142
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2819919 - 2820725 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGGCAAACCCACCACCAGCAGCAACAGTCGCAACGTGGCTTCCGAGATCGCCTACCTCGCCCGAGCATTGAAAGC
ACCATCGCTGGCCGCAGCAGTCGAACGGCTGGCCGAACGCGCACGGGCCGAGGACTGGTCCCACGAGGAGTTCCTGGCCG
CCTGTCTGCAACGCGAGGTCGCCGCCCGCGAATCCCACGGCGGCGAGGGACGCATCCGCACCGCCCGATTCCCGAGCAGG
AAGTCCCTCGAGGAGTTCGACTTCGACCACCAACGCTCCCTGAAACGCGACACGATTACGCATCTCGGAACACTGGACTT
CATCGCGGGCAAGGACAACGTGGTCTTCCTCGGTCCTCCCGGCACCGGCAAGACCCACCTGTCCATCGGACTCGGGATCC
GGGCCTGCCAGGCCGGACACCGCGTCTCGTTTGCCACCGCCGCCGAGTGGGTCGCCCGGCTGGCTGAGGCCAGCCACGCC
GGACGGCTCCAGCAGGAGCTGGTCAAACTCGGCCGGATCCCCTTGCTGATCATCGACGAGGTCGGCTACATCCCCTTCGA
AGCCGAAGCCGCGAACCTGTTCTTCCAACTGGTCTCCTCCCGCTACGAGAGAGCCAGCCTGATCGTCACCAGCAACAAAC
CCTTCGGCCGCTGGGGCGAGGTCTTCGGCGACGACGTCGTCGCCGCGGCCATGATCGACCGCCTCGTGCACCACGCCGAA
GTCATCTCCCTGAAAGGAGACAGCTACCGCCTCAAAGACCGCCAAGACCTCGGTCGCGTCCCCGCGGCCACCAACACCAA
CGACTAA

Protein sequence :
MAGKPTTSSNSRNVASEIAYLARALKAPSLAAAVERLAERARAEDWSHEEFLAACLQREVAARESHGGEGRIRTARFPSR
KSLEEFDFDHQRSLKRDTITHLGTLDFIAGKDNVVFLGPPGTGKTHLSIGLGIRACQAGHRVSFATAAEWVARLAEASHA
GRLQQELVKLGRIPLLIIDEVGYIPFEAEAANLFFQLVSSRYERASLIVTSNKPFGRWGEVFGDDVVAAAMIDRLVHHAE
VISLKGDSYRLKDRQDLGRVPAATNTND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-39 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-45 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-45 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-45 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 8e-45 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-45 42
unnamed CAA21402.1 - Not tested HPI Protein 8e-45 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-45 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-45 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-44 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-45 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-45 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpase1 YP_001104819.1 transposase VFG1460 Protein 3e-39 45
tpase1 YP_001104819.1 transposase VFG1515 Protein 3e-45 42
tpase1 YP_001104819.1 transposase VFG1627 Protein 3e-45 42
tpase1 YP_001104819.1 transposase VFG1606 Protein 3e-45 42
tpase1 YP_001104819.1 transposase VFG1663 Protein 1e-44 42