Gene Information

Name : SACE_2352 (SACE_2352)
Accession : YP_001104577.1
Strain : Saccharopolyspora erythraea NRRL 2338
Genome accession: NC_009142
Putative virulence/resistance : Unknown
Product : transposase, IS111A/IS1328/IS1533
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 2551472 - 2552635 bp
Length : 1164 bp
Strand : -
Note : -

DNA sequence :
TTGGACGTCGGTAAAGGCGCGCACCACGCGACCGGCCTGGCGCCGGACGCCACCCGGCTGCACGACGCGGCACTGCCCAA
CACCGAAGCCGGATTGCGCAAGGTCTTCGACCGGCTCGCGCGGCACGGGCAGGTGCTGGTGGTGGTGGATCAGCCGGCCT
CGATCGGTGCCCTGCCGGTGGCCGTGGCCCGAGCCTGCGGGCATGACGTGGCCTATCTGCCGGGCCTGGCCATGCGCCGG
ATCGCTGACCTGCACCCGGGCAACGCCAAGACCGACGCCCGCGACGCCTACGTCATCGCTGATGCCGCCCGCACCTTGCC
GCACGCCCTGCGGCGGGTCGACACCGGCGAGGAAACCCTGGCCGAACTGGAGGTGCTCGTCGGGTTCGACGACGACCTCG
CAGGCGAGGCCACCAGGATCGGCAACCGCATCCGGGGCCTGCTGACCCAGATCCATCCCGCCCTGGAGCGCGTCCTGGGA
CCCAAGATCCAGCACCCCGCGGTGCTGGAAATCCTCTCCCGGTGCGGCGGGCCTGACGGGATCCGCAAAGCCGGACAACG
ACAGCTGACCTCGATCGCGGCCACCCGCGCTCCCCGCATGGGCCAGGCCCTCGTCGAGGCGATCGTGTCCGCGCTCGACG
AACAGACCGTGTCGGTGCCCGGCGCCAAGACCGCCGAGCTCGTACTCCCCCGCCTGGCCGATTCGCTGAAAACCGTGCTG
CAGCAACGGAGAACAGTCGCCGACGAGGTCGAAGGGATACTCGATGCGCACCCTCTTGCCGGGGTCCTGACCTCCATGCC
CGGCATCGGGGTCAGGACCGCAGCCCGCATCCTCCTCGAAGTCGGCGACGGCTCGGCGTTCAAAACCTCCGGACATCTGG
CCGCCTACGCAGGCCTGGCCCCGGTCACCCGCCGCTCCGGCAGCTCCATCCGAGGAGAACACCCCAACCGAGGCGGCAAC
AAACATCTCAAACGGGCGTTCTTCCTCGCCGCCTTCGCCGCCCTGGCCGACCCCACCAGCAGGGCCTACTACCAGCGGAA
ACGAGACGAAGGCAAGAAACACAACGCCGCCCTCATCTGCCTGGCCCGACGCCGCTGCGACGTCCTGCACGCCATGCTCC
GCACCAAAACGAAATACCAAGCACCAGCCCCTCAAGCCGCTTGA

Protein sequence :
MDVGKGAHHATGLAPDATRLHDAALPNTEAGLRKVFDRLARHGQVLVVVDQPASIGALPVAVARACGHDVAYLPGLAMRR
IADLHPGNAKTDARDAYVIADAARTLPHALRRVDTGEETLAELEVLVGFDDDLAGEATRIGNRIRGLLTQIHPALERVLG
PKIQHPAVLEILSRCGGPDGIRKAGQRQLTSIAATRAPRMGQALVEAIVSALDEQTVSVPGAKTAELVLPRLADSLKTVL
QQRRTVADEVEGILDAHPLAGVLTSMPGIGVRTAARILLEVGDGSAFKTSGHLAAYAGLAPVTRRSGSSIRGEHPNRGGN
KHLKRAFFLAAFAALADPTSRAYYQRKRDEGKKHNAALICLARRRCDVLHAMLRTKTKYQAPAPQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 5e-96 63
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 3e-56 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACE_2352 YP_001104577.1 transposase, IS111A/IS1328/IS1533 VFG1494 Protein 3e-96 63