|
Name : SNSL254_pSN254_0186 (SNSL254_pSN254_0186) Accession : YP_001102058.1 Strain : Genome accession: NC_009140 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0210 EC number : - Position : 163712 - 165223 bp Length : 1512 bp Strand : + Note : identified by similarity to GB:CAG73527.1 DNA sequence : ATGAAACAACTTCCTCCTGACACACCAGAACAATCACTGATCACTCAGTACAAAGGGCCTCGCCTTGTCGTTAAGGCCTA CGCTGGAACGGGTAAAACCACGACACTGGTGAAGTACGCCCACAACAACCTCGATTCACGTATCCTCTACTTGGCATACA ACAGGGCTATCCGCGACGAGGCAAGAGAAAAGTTTCCTGCAAACGTAGACTGCAAAACGTCCCACCAGCTTGCCTACGCC ACTATAGGAAGGGGCTACCAGCACAAACTCTCCGGCAACCTAAGGCTCACCGATATTGCCCAAGCGGTGAATACCAAGAA CTGGACGTTTGCCAAAGATATTCTCGATACGCTCAACGCCTTTATGTGTAGTGCAGACATGCGGATTCTTTATACGCATT TTGCTCGCGCCGATACGGGTAAAGTGCTTACGTCCAAACAGGAGAGATACCAAATCCAGGTGGTCGAAGGTGCTGAGCTC ATATGGAAACGGATGACAAACGTTCAAGATCCGTTCCCGACCGTACACGATTGCTACCTCAAACAGTATCAGCTCGGGAT GCCGAATCTGTCTCGCCGGTACACCACCATTCTTTTTGATGAAGCACAAGACGCTAACCCCGTAACAAGTAGCATCGTCC TACAGCAGAACTGCAAGGTAATCCTGGTTGGAGATCGCCACCAGCAGATCTATAGGTTCAGAGGCGCAAACAACGCCCTT GATAGCAAAGAGCTCATGAACGCCGACCAACTCTATCTCACTCATAGCTTCCGCTTTGGCCCCAACGTTTCGCTGGTGGC AAACGCCCTTCTTGAACTCAAAGGTGAAACACGACCTGTTGTTGGCCGGGGACCAGCAGATCAGGTACTCATGTTTTTAC CAGGTGACGTGGGCCACCGCGCAATACTTCACCGAACCGTCATGGGGGTTATAGAGACGGCGCTCTCTGCGACCGAATCC GGAGCGCAGGTATTCTGGGTCGGTGGAATCGACGCTTACCAGATCAATGAGCTCCAGGATTTGTACTGGTTTTCGATGGC AGAGCCAGACCGGGTAAAGAATAAGAAACTGCTTGATGAGTATGAAGACTACTTCGAGTATCAAGAAGTAGCGAAGGCGA CCAAAGACCCTGAGATGATGAGGGCTGTCAAGATCATCAACAGCTACGATGAAATCCCTGAACGACTCACCACTCTACGA CGCAATACAGTCAAAGAAGAGTTTGGGGCTGACATTACGGTCTCAACAGCTCATCGGTGCAAAGGGTTGGAGTGGGACTT TGTTCAGCTCTATGACGACTTTCCGGATGTCCTGGACCCAGAGCTCGACCCAATGGCCCGTGACGATGAAATAAACCTGC TCTACGTTGCATCCACCAGAGCGATGCGAATCCTTGCGTTGAACAGCGCTGTCGAGATGGTTATCCGCTACATCACCCAA AAACGCATGGTCGAGAAGCAGATGAAGATGGCCGCAGAAGCGACAGAAGTTGAAGAGGACACGACCAAATAG Protein sequence : MKQLPPDTPEQSLITQYKGPRLVVKAYAGTGKTTTLVKYAHNNLDSRILYLAYNRAIRDEAREKFPANVDCKTSHQLAYA TIGRGYQHKLSGNLRLTDIAQAVNTKNWTFAKDILDTLNAFMCSADMRILYTHFARADTGKVLTSKQERYQIQVVEGAEL IWKRMTNVQDPFPTVHDCYLKQYQLGMPNLSRRYTTILFDEAQDANPVTSSIVLQQNCKVILVGDRHQQIYRFRGANNAL DSKELMNADQLYLTHSFRFGPNVSLVANALLELKGETRPVVGRGPADQVLMFLPGDVGHRAILHRTVMGVIETALSATES GAQVFWVGGIDAYQINELQDLYWFSMAEPDRVKNKKLLDEYEDYFEYQEVAKATKDPEMMRAVKIINSYDEIPERLTTLR RNTVKEEFGADITVSTAHRCKGLEWDFVQLYDDFPDVLDPELDPMARDDEINLLYVASTRAMRILALNSAVEMVIRYITQ KRMVEKQMKMAAEATEVEEDTTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4664 | NP_458743.1 | putative DNA helicase | Not tested | SPI-7 | Protein | 4e-121 | 54 |
| t4355 | NP_807948.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-121 | 54 |
| RL034 | AAP84161.1 | putative DNA helicase | Not tested | PAPI-1 | Protein | 6e-109 | 50 |
| EXA45 | ABD94654.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 3e-109 | 50 |
| unnamed | ABR13373.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-110 | 50 |
