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Name : istA (SNSL254_pSN254_0155) Accession : YP_001102028.1 Strain : Genome accession: NC_009140 Putative virulence/resistance : Unknown Product : transposase IstA for insertion sequence IS1326 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 136735 - 138258 bp Length : 1524 bp Strand : - Note : identified by similarity to SP:Q46087; match to protein family HMM PF00665 DNA sequence : GTGATAAACGTGGCGATATTGAGCGCAATTCGACGCTGGCATTTTCGCGATGGTGCGTCGATTCGGGAAATAGCCCGACG AAGCGGCCTGTCCAGGAACACCGTTCGCAAGTATTTGCAAAGCAAGGTGGTTGAACCGCAGTACCCAGCGCGAGACAGCG TTGGCAAGTTAAGTCCTTTTGAGCCCAAGTTAAGGCAGTGGCTCTCCACCGAGCACAAAAAGACAAAGAAGCTGCGCAGA AACCTGCGCAGCATGTACCGGGATTTGGTCGCTTTGGGCTTTACCGGGTCTTATGACCGAGTGTGTGCCTTTGCCCGACA GTGGAAAGATTCCGAACAGTTCAAGGCGCAAACCTCGGGCAAGGGTTGTTTCATCCCCTTGCGCTTTGCTTGTGGCGAAG CCTTCCAATTCGATTGGAGTGAGGACTTTGCCCGCATAGCGGGCAAACAGGTCAAACTTCAGATTGCCCAGTTTAAGTTG GCCCACAGCCGGGCCTTTGTGCTTCGGGCTTACTACCAGCAAAAACATGAAATGCTGTTTGATGCCCACTGGCATGCCTT TCAAATCTTCGGTGGCATTCCCAAGCGCGGCATCTACGACAACATGAAGACCGCTGTGGATTCGGTGGGGCGTGGCAAAG AGCGCAGGGTCAATCAGCGGTTCACTGCCATGGTCAGCCACTACCTGTTTGATGCGCAGTTCTGTAATCCAGCATCGGGT TGGGAGAAAGGCCAGATTGAGAAGAACGTGCAGGATTCCCGCCAACGCCTGTGGCAAGGGGCACCAGACTTTCAAAGCCT TGCTGATTTGAATGTGTGGCTTGAGCATCGCTGCAAAGCGCTGTGGTCTGAGCTGCGCCACCCCGAATTGGACCAAACCG TGCAAGAGGCCTTTGCCGATGAACAAGGCGAGTTGATGGCGCTACCCAATGCCTTTGATGCATTCGTGGAGCAAACCAAG CGAGTCACTTCAACCTGCCTTGTTCACCACGAGGGCAATCGCTACAGCGTTCCTGCCAGTTACGCCAACAGGGCCATCAG CCTTCGGATTTATGCAGACAAGCTGGTGATGGCTGCCGAAGGCCAACACATTGCCGAGCATCCAAGATTGTTTGGCAGTG GCCACGCTCGGCGTGGCCACACACAATACGACTGGCACCATTACTTGTCTGTGCTTCAGAAGAAACCTGGGGCGTTGCGC AATGGTGCGCCATTTGCTGAATTGCCACCCGCGTTCAAGAAGCTTCAATCCATCTTGCTGCAACGCCCCGGCGGTGACCG TGACATGGTGGAAATTCTGGCCCTTGTATTGCACCACGATGAAGGTGCGGTACTCAGTGCTGTGGAATTGGCATTGGAGT GTGGCAAGCCATCGAAGGAGCATGTGCTTAATCTGTTGGGACGTTTGACCGAAGAACCTCCACCCAAACCGATTCCAATT CCCAAGGGGTTAAGGCTGACATTGGAACCACAGGCCAACGTGAACCGCTATGACAGTTTAAGGAGAGCCCATGATGCAGC ATGA Protein sequence : MINVAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVVEPQYPARDSVGKLSPFEPKLRQWLSTEHKKTKKLRR NLRSMYRDLVALGFTGSYDRVCAFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKL AHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVNQRFTAMVSHYLFDAQFCNPASG WEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEHRCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTK RVTSTCLVHHEGNRYSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYDWHHYLSVLQKKPGALR NGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAVLSAVELALECGKPSKEHVLNLLGRLTEEPPPKPIPI PKGLRLTLEPQANVNRYDSLRRAHDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 100 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 2e-106 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-93 | 44 |
