Gene Information

Name : HEAR0701 (HEAR0701)
Accession : YP_001099022.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 700382 - 701623 bp
Length : 1242 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGCCAAAACTCGCAAAACCGCTCACTGATTTACAGGTAAGAACTGCCAAACCAGTCGTAGGAAAAGCTCATACCTTAGC
TGATGGTTTGGGCATGTATCTTGAGATCACCGCAGTGGGTACAAAGATATGGCGCATGTCGTATCGTCAGGAGAACGGCA
AACAAAACCGTTTGACCTTCGGTTCATATCCTGAGATATCTCTTACGGAAGCAAGAGCCAAACGTGCAGAGGCGCGTAAG
CTACTAGCTGATGGTATTGACCCTGCCCAATTCAAACGTGAAGCAAAAGAAGCTAAAGCTATTGCGGGTACGCATACCTT
TGAGACAGTCGCTCACGCTTGGTTGAAGAAAACCTCAGCGATGCGCGCTTCTACTACCCAAGAAAAAGTAACGAATTGGC
TGCAAAAAGATGTGTTTCCATTTATCGGGCATATGCCTGTTTCTTTAATCAAACCGTTAAATGTTTTAACGACAGTACAA
AAGATGGAAGCCCGTGGCTCAGTTGAATCCGCCCATCGAGTGAAACAGATATGTGGTCAAGTACTGCGGTATGCCGTTGC
TACTGGACTCGCGGAACGTGATGTGACCGCCGATTTAAAAGGTGCATTGTCCGTTGTGCCAAAGACAAACTATGCGGCCA
TCATAGAACCTAAACAGGCCGGAGTATTACTTCGCTCGATCTTTGGTTATACGGGCCATCCCTATGCAGTGGCGGCACTT
AAATTATCCCCTCTTCTTTTTGTACGACCAGGAGAATTGCGCTCTGCGGAATGGAAAGAAATCGACCTAGATGCAGCAGA
GTGGCGCATACCGGGCGAGAAAATGAAGATGAAGATTGACCATCTAGTCCCCCTATCAACACAAGCGATAGAAATTCTAC
GTAATGTACACGCCATGACGGGACATGGAAAATATGTATTCCCAAGCATCCGAACTTACGAACGATGCATGAGTGAAAAT
ACAATTAATGCTGCTTTACGAAGTATGGGCTACGACAAAGAAACAATGACCGCACACGGCTTCCGCGCGATGGCCAGAAC
CATTATGGATGAGGTATTAGGTGAACGCGTGGATCTGATTGAACATCAATTAGCTCATGCCGTAAAAGATCCAAACGGCC
GAGCATACAATCGCACTGCGCATTTGCCGGCTCGTCGGCAAATGATGCAGCGGTGGGCAGATTATTTAGATTCGTTACGA
AAGGGCGCAGACGTAATATCGCTCAAAACAAATCTTGTATAA

Protein sequence :
MPKLAKPLTDLQVRTAKPVVGKAHTLADGLGMYLEITAVGTKIWRMSYRQENGKQNRLTFGSYPEISLTEARAKRAEARK
LLADGIDPAQFKREAKEAKAIAGTHTFETVAHAWLKKTSAMRASTTQEKVTNWLQKDVFPFIGHMPVSLIKPLNVLTTVQ
KMEARGSVESAHRVKQICGQVLRYAVATGLAERDVTADLKGALSVVPKTNYAAIIEPKQAGVLLRSIFGYTGHPYAVAAL
KLSPLLFVRPGELRSAEWKEIDLDAAEWRIPGEKMKMKIDHLVPLSTQAIEILRNVHAMTGHGKYVFPSIRTYERCMSEN
TINAALRSMGYDKETMTAHGFRAMARTIMDEVLGERVDLIEHQLAHAVKDPNGRAYNRTAHLPARRQMMQRWADYLDSLR
KGADVISLKTNLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-61 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-61 41
int AAC31482.1 CP4-like integrase Not tested LEE Protein 3e-61 41
int ACU09430.1 integrase Not tested LEE Protein 3e-61 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 6e-62 41
int AAD44730.1 Int Not tested SHI-2 Protein 6e-62 41
int CAC39282.1 integrase Not tested LPA Protein 4e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HEAR0701 YP_001099022.1 integrase VFG0783 Protein 1e-61 41