Gene Information

Name : arsB (HEAR0501)
Accession : YP_001098838.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Resistance
Product : Ars family arsenical pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 503865 - 505148 bp
Length : 1284 bp
Strand : +
Note : Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 7848659, 1535622; Product type t : transporter

DNA sequence :
TTGCTCACCGCATTTATTATTTTTTTACTGACACTTACGCTAGTTATCTGGCAACCGCGTGGACTCGGCATCGGCTGGAG
CGCGACCCTGGGTGCAGTGCTGGCACTCCTGTTCGGCGTTATCAGCTTTGCCGATATTCCGGTGGTCTGGCAGATAGTAT
GGAATGCAACCGGCGCTTTCATAGCGATCATCATCATTAGTCTGGTGCTGGATCAGGCAGGCTTTTTTGAATGGGCGGCA
CTACACGTTGCGCGGTGGGGCGGCGGCAAGGGGCGAAAATTGTTTGTCTTGCTGGTGTTGCTCGGTGCCGTGGTATCTGC
ATTGTTCGCCAACGATGGCGCGGCCCTGATCCTCACGCCAATTGTCATCGCGATGTTGCTGGGATTAAAGTTCTCGCCAC
AGGCGACATTAGCCTTTGTAATGGCGGCCGGATTTATTGCTGATACGGCCAGCCTGCCGCTGATCGTTTCCAACCTGGTC
AATATCGTATCGGCGGATTATTTCAATATTGGTTTTGCACGCTATGCATCGGTGATGATGCCGGTGAATCTCGTCTCTGT
GGCCATGACCTTGCTGGTCCTGATCTGGTATTTCAAACACGATATCCCAAAAGACTACGATGTCCAGCAATTGAAAAATC
CTGCAGATGCGATCCGTGATCGCACGACTTTTATTGCCGGCTGGTGGGTACTCGGTTTATTACTCGTCGGATTTTTCTGG
CTGGAAGAAAAAGGAGTGCCTGTCAGTGCAGTAGCGGCGGTTGGCGCAATTGTTTTATTGGCGATTGCCGCGAAAGGTCA
TGTGATCTCGACGCGCGAAGTCATCAAGCATGCACCGTGGCAGGTCGTGTTCTTTTCGCTGGGAATGTATCTGGTCGTCT
ATGGTTTACGCAATGCGGGCCTGACTGGATACCTAACCGGTTTATTGAATGAATTTTCCGCGCACGGCATTTGGGGCGCA
GCGATCGGTACCGGGCTGATGACTGCGCTACTGTCTTCGATCATGAACAATATGCCGACTGTACTCATAGGCGCGCTGTC
AATTGATGCAACGACAGCACAAGGGGCAGTGCGGGAAGCGATGATCTACGCCAATGTGATAGGCAGTGATCTTGGTCCAA
AGATCACACCGATAGGCAGTCTGGCGACCTTACTGTGGCTGCATGTGCTGGCAGGCAAAGGCATACGTATCTCGTGGGCT
TATTACTTCCGCGTTGGAGCCTTACTGACGCTGCCGGTGTTGTTGGTCACGCTTGCCGCGCTGGCGATTCGACTCAGCGT
TTAA

Protein sequence :
MLTAFIIFLLTLTLVIWQPRGLGIGWSATLGAVLALLFGVISFADIPVVWQIVWNATGAFIAIIIISLVLDQAGFFEWAA
LHVARWGGGKGRKLFVLLVLLGAVVSALFANDGAALILTPIVIAMLLGLKFSPQATLAFVMAAGFIADTASLPLIVSNLV
NIVSADYFNIGFARYASVMMPVNLVSVAMTLLVLIWYFKHDIPKDYDVQQLKNPADAIRDRTTFIAGWWVLGLLLVGFFW
LEEKGVPVSAVAAVGAIVLLAIAAKGHVISTREVIKHAPWQVVFFSLGMYLVVYGLRNAGLTGYLTGLLNEFSAHGIWGA
AIGTGLMTALLSSIMNNMPTVLIGALSIDATTAQGAVREAMIYANVIGSDLGPKITPIGSLATLLWLHVLAGKGIRISWA
YYFRVGALLTLPVLLVTLAALAIRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-106 72
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-82 56
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-80 55
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-82 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_001098838.1 Ars family arsenical pump BAC0031 Protein 7e-109 73
arsB YP_001098838.1 Ars family arsenical pump BAC0577 Protein 8e-103 72
arsB YP_001098838.1 Ars family arsenical pump BAC0578 Protein 3e-105 71
arsB YP_001098838.1 Ars family arsenical pump BAC0576 Protein 6e-106 71
arsB YP_001098838.1 Ars family arsenical pump BAC0574 Protein 2e-80 56
arsB YP_001098838.1 Ars family arsenical pump BAC0575 Protein 2e-81 55