Gene Information

Name : xerD (HEAR0420)
Accession : YP_001098767.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 416489 - 417418 bp
Length : 930 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7744017, 9268326, 1036130, 10635320; Product type e : enzyme

DNA sequence : 
ATGAACAAGGTGGCGAAAGTTGCGGCGGATACCGATGCCCTGCCCAGTCAGGCCCAGATCGACGAATTCTGCGACACCCT
GTGGCTGGAAGACGGGCTGGCAAAGAATTCGCTTGAGGCATATCGCCGCGACTTGCGCCTGTTTGCTGTCTGGCTGCAAG
CCGAGCGCGGCAAGACTTTGCTGGCTGCGCATGCGGACGATGTGAATGCGTATTTTTTCGCACGTCATGAAGTCACCAAG
GCAACTTCATCCAATCGCCGGCTGGCCGTGCTCAAGCGCTTTTATCAATTGGCTCTGCGGCAAAACAGGATCAGCGACGA
CCCTTGCCTGAAAATGCGTTCGGCCAAACAGCCGCTGCGCATACCGAAAACACTATCGGAAGCGCAGGTGGAGGCATTGC
TGGCAGCACCGGATGTGACGACGCCACTGGGCTTGCGCGACCGCACGATGCTGGAGCTGATGTATGCCAGCGGCTTGCGT
GTCACGGAACTGGTGTTGTTGAAGTCGATAGAAGTCGGGATGAATGAAGGCGTCTTGCGCATTACCGGCAAAGGCGGGAA
AACGCGCCTGGTACCGTTCGGTGAGGAAGCACGGGTATGGATAGAGCGTTATCTGAAAGAAGCGCGTCCGTTGATTCTGG
ATGGGCAGATCGATGATGCCCTGTTCGTCACGGCTCGTGGCGCGGCGATGACGCGGCAGATGTTCTGGACGCTGATCAAG
AAACACGCGGCAGCCGCTGAAATCAATGCGCCGCTATCGCCGCATACCCTGCGCCACGCTTTCGCCACGCATCTGCTGAA
CCATGGTGCCGATTTGCGGGTGGTCCAGATGCTGCTCGGTCACTCCGATATTTCGACCACGCAAATTTATACGCACGTCG
CGCGTGAACGCCTGAAGCACCTGCATCAGATCCATCATCCGCGAGGCTAA

Protein sequence : 
MNKVAKVAADTDALPSQAQIDEFCDTLWLEDGLAKNSLEAYRRDLRLFAVWLQAERGKTLLAAHADDVNAYFFARHEVTK
ATSSNRRLAVLKRFYQLALRQNRISDDPCLKMRSAKQPLRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLR
VTELVLLKSIEVGMNEGVLRITGKGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIK
KHAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLKHLHQIHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-59 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-59 56