Gene Information

Name : arsB (HEAR3301)
Accession : YP_001101528.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Resistance
Product : Ars family arsenical pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 3262479 - 3263759 bp
Length : 1281 bp
Strand : -
Note : Evidence 1 : Function experimentally demonstrated in the studied organism; PubMedId : 8674982; Product type t : transporter

DNA sequence :
ATGCTGACTGCATTCCTGATTTTTCTCGCCACGATCGTACTGGTGATCTGGCAACCCAGAGGGTTGGGCATAGGCTGGAG
CGCGCTGGCTGGCGCCGCCTTGGCGCTGGTGTTGGGCGTCGTGCAGCTTGCCGATATCGCTACCGTCTGGGGCATCGTCT
GGAACGCGACGCTTACCTTCATCGCCGTCATCATCATCAGCCTGTTGCTGGATGAGGCAGGGTTTTTCGAATGGGCGGCA
TTGCATGTGGCGCGCTGGGGCCGTGGCTGCGGACGCCGGCTGTTCGTCTGGCTGGTGCTGCTTGGCGCTGCGGTGGCCGC
CCTGTTTGCCAATGATGGCGCGGCACTGATCCTGACGCCCATCGTGATTGCGATGCTGCTGGCGCTGCAATTTTCGCCGA
CGGCGACGCTGGCCTTCGTGATGGCGGCCGGTTTCATTGCCGATACGGCCAGTCTGCCGCTGATCGTGTCGAATCTGGTG
AACATCGTATCAGCCGATTTTTTCAATATCGGTTTTGCCGAATATGCATCGGTGATGGTGCCGGTCAATCTGGCGTCCAT
CGCCGCGACACTCGGGATGCTGCTGTTCTTTTTCAAGCGCGATATCCCGGCGACTTACGACTTGCATCTCTTGCGTGCGC
CGCAGCAGGCGATACGCGATGGCGCGACTTTCCGTGCCGGTTGGTGGGTGCTGGCTTTATTGCTGGCCGGATTTTTCGGT
CTGGAACACGTAGGCGTGCCTATCAGTGCAGTGGCGACCGCTGGCGCGCTGGTTCTGTTGATGGTCGCTGCACGCGGGCA
TGTCATTTCCACGCGCAAGGTATTGCGCGAAGCGCCGTGGCAGATCGTGATCTTTTCGCTCGGCATGTATCTGGTTGTGT
ACGGCTTGCGCAATGCCGGACTGACCGATTATCTGGTCCTGGTGCTGAACCGGCTGGCTGAACATGGGGTGTGGAGTGCG
GCGATCGGTACCGGCGTCCTGTCGGCACTGCTGTCATCGGTAATGAACAATATGCCGGCGGTGCTGGTCGGTGCACTGGC
GATCGATGCCAGCGTGGCGCAGGGCGTCACAAGAGAAGCGATGATTTATGCCAATGTGATCGGCAGCGATCTGGGGCCGA
AAATCACGCCTATCGGCAGCCTGGCCACGCTGTTGTGGCTGCATGTGCTGGCGCGCAAGAATATCCGCATCACCTGGGCT
TATTACTGCAAGGTCGGTTTTGTGCTGACCTTGCCGATACTGCTGTGCACGCTGATTGCGCTGGCACTGCGTTTGCAGTA
A

Protein sequence :
MLTAFLIFLATIVLVIWQPRGLGIGWSALAGAALALVLGVVQLADIATVWGIVWNATLTFIAVIIISLLLDEAGFFEWAA
LHVARWGRGCGRRLFVWLVLLGAAVAALFANDGAALILTPIVIAMLLALQFSPTATLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFNIGFAEYASVMVPVNLASIAATLGMLLFFFKRDIPATYDLHLLRAPQQAIRDGATFRAGWWVLALLLAGFFG
LEHVGVPISAVATAGALVLLMVAARGHVISTRKVLREAPWQIVIFSLGMYLVVYGLRNAGLTDYLVLVLNRLAEHGVWSA
AIGTGVLSALLSSVMNNMPAVLVGALAIDASVAQGVTREAMIYANVIGSDLGPKITPIGSLATLLWLHVLARKNIRITWA
YYCKVGFVLTLPILLCTLIALALRLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-111 75
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-81 56
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-79 55
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-82 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_001101528.1 Ars family arsenical pump BAC0576 Protein 2e-112 76
arsB YP_001101528.1 Ars family arsenical pump BAC0578 Protein 1e-112 76
arsB YP_001101528.1 Ars family arsenical pump BAC0577 Protein 4e-110 75
arsB YP_001101528.1 Ars family arsenical pump BAC0031 Protein 1e-112 75
arsB YP_001101528.1 Ars family arsenical pump BAC0574 Protein 2e-80 55
arsB YP_001101528.1 Ars family arsenical pump BAC0575 Protein 8e-82 54