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Name : kdsD (HEAR3104) Accession : YP_001101334.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3065493 - 3066521 bp Length : 1029 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12805358; Product type e : enzyme DNA sequence : ATGAGTGTACCCCATGCCAAAAAACCACCGGCAACTTTTGATGCCAAGAGCGCAACGCGCGCGCTGCAATTTGCGCGCGA TACCTTGCAAATCGAGGCAGATGCCATCCTTGCGCTGAAACAGCGCATCAGCAATGAAAGCGGCGAACAATTCATCCAGG CTGTCGCGCTGCTATTGAACTGCACAGGCCGCGTAGTTGTATCCGGCATCGGCAAGTCCGGCCATATCGCCCGCAAAATC GCCTCCACGCTGGCTTCAACCGGCACGCCCGCCCTGTTCGTACATGCAGCGGAAGCCTCGCACGGCGATCTGGGCATGAT CACGGCTGACGATGCGCTGATTGCAATTTCGTATTCCGGCGAAGCCGGCGAACTGGTTGCCATCGTTCCCATCATCAAAC GCATGGGCGCAACCTTGATCACGATTACCGGCAATGACGATTCCACGCTGGCGCAACTGGCCGACGTGCACTTGAACGTC AGGGTCGACAAGGAAGCCTGCCCCTTGAATCTGGCACCGACAGCCAGCACCACGGCGACGCTGGCCATCGGCGATGCATT GGCGGTCGCCCTGCTCGATGCACGAGGCTTCGGCGAAGAGGATTTTGCGCGCTCTCATCCCGGCGGCGCGCTGGGCCGTC GCTTGCTGACCCATGTGCGCGATGTGATGCGCACCGGCGACGCGATTCCAACCGTGGGCAAAGATGCCAGCCTGTACACA GCGCTACTGGAAATCAGCAGAAAAGGCATGGCAATGACGGCGGTAGTCGATGCCGGCGGACGCGCCATCGGCGTCTTCAC CGACGGCGATTTGCGCCGCCTGATCGAGAACCAGCGCGACTTTTCCACCTTGTCGATTGCTGAAGTCATGCATGCGAACC CGCGCAGCGTCCAGCCGGATCAACTGGCAGTAGATGCTGTCAAGATGATGGAAGAATTCCGCATCAACCAGCTGCTGGTA ACGAATGCCGACGGCAAACTGGTAGGCGCGCTGCATATTCACGATTTGACACGCGCGAAAGTAATCTGA Protein sequence : MSVPHAKKPPATFDAKSATRALQFARDTLQIEADAILALKQRISNESGEQFIQAVALLLNCTGRVVVSGIGKSGHIARKI ASTLASTGTPALFVHAAEASHGDLGMITADDALIAISYSGEAGELVAIVPIIKRMGATLITITGNDDSTLAQLADVHLNV RVDKEACPLNLAPTASTTATLAIGDALAVALLDARGFGEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPTVGKDASLYT ALLEISRKGMAMTAVVDAGGRAIGVFTDGDLRRLIENQRDFSTLSIAEVMHANPRSVQPDQLAVDAVKMMEEFRINQLLV TNADGKLVGALHIHDLTRAKVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-55 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-55 | 47 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-55 | 46 |
