|
Name : gabD (HEAR2670) Accession : YP_001100913.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I, NADP-dependent Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2638453 - 2639931 bp Length : 1479 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211; Product type e : enzyme DNA sequence : ATGTTGCGTGCCGCCAATAATCCGTTCCAGATGAAAGATCCTTCCCTGCTGCGCAATCTGGCCTACATCGATGGGACATG GGCAGGAGCGGCGACGAACTTCGACATCAGCAATCCTGCAGATGGCAGCATCATCGGCAGCGCGCCCAACATGGGTGCAG AAGAAACTGAAACGGCCATCCGGGCGGCACAATCTGCGTTTCCTGCATGGGCGGCAAAAACCGGCAAGGAACGCGCCATC ATCATGCGTCAGTGGTTCGACCTGATCATCGCCAACGTAGATGACCTGGCGATCCTGATGACGGCGGAACAGGGCAAACC GCTGATAGAGTCCAGAGGCGAAGTGATCTACGGCGCCAGTTTTATCGAATGGTTTTCCGAAGAAGCCAAGCGCGTCAGCG GCGATGTGATGGCCTCGACCTGGAACGATAAACGCACGCTCACGATCAAGCAGCCGATAGGCATTTGTGCAGCGATTACA CCGTGGAATTTTCCGATTGCGATGATCACGCGCAAAGTCGCGCCAGCCGTTGCTGCCGGTTGTACAATTGTGATCAAGCC GGCTGAACAAACCCCTTTGTCAGCGCTCGCCATCGCGGAACTGGCGCATCGTGCCGGTTTGCCGGCGGGCGTCATCAATG TGATCACGGCAGATGCAGAAAATTCTATCGTCGTCGGCAAGACCTTGTGTGCCAGCCCGATCGTGCGTCACGTGTCCTTC ACCGGCTCCACACCGGTCGGACGCATACTGATGGAGCAATGCGCCCCTACCGTCAAAAAAATCGCGCTGGAACTCGGCGG TCACGCGCCGTTCATCGTATTTGATGATGCCGATCTGGATGCGGCCGTCACAGGTGCATTGCAATCCAAATATCGCAATG CCGGCCAGACCTGCGTGTGTACCAACCGCTTTTATGTGCACGAATCGATTTACGATGTCTTTGTGCAAAAGCTCGCTGCA GGCGCAGCCAGGATCAAGGTCGGCAACGGGTTCGAGCAAGGTGTGCTGCAAGGTCCGCTGATAGACGACCAGGCAATCCG AAAAGTCGAACAACATGTCAGCGACGCTGTCAAAAAAGGGGCAAGCGTGATGACCGGCGGGAAAAAACATGCGCTGGGCG GACACTTTTATGAGCCCACCGTATTGTCGAATATCACCGACGACATGAGCATCATGCATGAAGAAACCTTCGGCCCGGTC GCAGCCATCGTCAAGTTCAAAACAGAGGATGAAGCAATTGCCGCGGCCAACAATACTGACTTCGGACTCGCCAGTTATTT CTATGCACGCGATATCAGCCGTGTCTGGCGCGTCGCCGAAAAACTGGAATACGGCATGGTTGGCATCAACACCGGCTTGA TCTCGAATGAAGTGGCACCCTTCGGCGGCGTCAAGCAATCCGGCCTCGGTCGCGAAGGATCGAAGTACGGCATTGACGAA TATCTGGAAATAAAATATCTGTGCATGGGCGGCATATGA Protein sequence : MLRAANNPFQMKDPSLLRNLAYIDGTWAGAATNFDISNPADGSIIGSAPNMGAEETETAIRAAQSAFPAWAAKTGKERAI IMRQWFDLIIANVDDLAILMTAEQGKPLIESRGEVIYGASFIEWFSEEAKRVSGDVMASTWNDKRTLTIKQPIGICAAIT PWNFPIAMITRKVAPAVAAGCTIVIKPAEQTPLSALAIAELAHRAGLPAGVINVITADAENSIVVGKTLCASPIVRHVSF TGSTPVGRILMEQCAPTVKKIALELGGHAPFIVFDDADLDAAVTGALQSKYRNAGQTCVCTNRFYVHESIYDVFVQKLAA GAARIKVGNGFEQGVLQGPLIDDQAIRKVEQHVSDAVKKGASVMTGGKKHALGGHFYEPTVLSNITDDMSIMHEETFGPV AAIVKFKTEDEAIAAANNTDFGLASYFYARDISRVWRVAEKLEYGMVGINTGLISNEVAPFGGVKQSGLGREGSKYGIDE YLEIKYLCMGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-148 | 61 |
