Gene Information

Name : ribD (HEAR2372)
Accession : YP_001100624.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal)/5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2347810 - 2348901 bp
Length : 1092 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9297088; Product type e : enzyme

DNA sequence :
GTGGAAATACATAGCGATGTGCAGGGCATACGCCTTGCGTTGGAACTGGCAGCCAGAGGCATGTTCACGACTGCGCCCAA
TCCGCGCGTGGGCTGCGTCATCGTCAAGGAAAATCAGGTCATAGGCAGCGGTTATACGCAGCCGGCCGGGCATGCGCATG
CGGAAGTGCAGGCGCTCAATGATGCGGCGAACAAAGGCTACGATGTGGCGGGATCCACTGTCTACGTGACGCTGGAACCA
TGCAGCCATCATGGCCGCACGCCGCCCTGTGCCGATGCACTGATCCGTGCGCGCGTGGCGCGTGTAGTGGCCGCGATTGC
CGATCCGAATCCGCTGGTTGCCGGACAGGGCTTGGCGCGGCTGGAAGCGGCAGGGATTGAGGTTGCGTGCGGCGTACTGG
AAGCAGAAGCGCGCGAAATCAATATCGGTTTCCTGTCGCGCATGCAGCACGGCAAGCCATGGGTGCGGATGAAATCCGCT
GCCAGCCTGGACGGCATGACTGCTTTGCACAATGGAATCAGCCAGTGGATTACCGGCGATGAAGCGCGTGCCGATGGGCA
TGTCTGGCGTGCACGTGCGTGCGCCATCCTGACCGGCATAGGTACGGTGAGGGAAGACGATCCGCAACTGACTGTACGCG
CCATCGACATACCGCGCCAGCCGCAACGCATAGTCATCGACAGCCAGCTGCAGATCAGCCCGCATGCGCGCGTATTGAGC
GGTGGCGGTACCTGGATCGTTGCTGCACAAGCTCATCCGGCCAGGGAAAAAATCCTGCGCGATCTCGGCAATGAAATCAT
TGTTTTGCCGAATGCGGACGGCAAGGTCGATTTGCCGGCGCTGATGCTGGAGCTGGGACGGCGCCAGATCAACGAACTGC
ATGTGGAAGCCGGTTTCAAGCTCAACGGTTCATTGATACGCGAAGACTGCGTCGATGAGTTGCTGGTTTATCTTGCGCCG
ACTTTGCTGGGCGATGCACAACGCATGTTCAATCTGCCGGTGCTGGAGTCGCTGGAACAGAAAAAAAATATGACTTTTCA
TGAGGTCAAGCAGATCGGTGCCGATTTGCGTATCCTTGCCCGTTTCATCTAA

Protein sequence :
MEIHSDVQGIRLALELAARGMFTTAPNPRVGCVIVKENQVIGSGYTQPAGHAHAEVQALNDAANKGYDVAGSTVYVTLEP
CSHHGRTPPCADALIRARVARVVAAIADPNPLVAGQGLARLEAAGIEVACGVLEAEAREINIGFLSRMQHGKPWVRMKSA
ASLDGMTALHNGISQWITGDEARADGHVWRARACAILTGIGTVREDDPQLTVRAIDIPRQPQRIVIDSQLQISPHARVLS
GGGTWIVAAQAHPAREKILRDLGNEIIVLPNADGKVDLPALMLELGRRQINELHVEAGFKLNGSLIREDCVDELLVYLAP
TLLGDAQRMFNLPVLESLEQKKNMTFHEVKQIGADLRILARFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-53 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-53 46