Gene Information

Name : ribC (HEAR2371)
Accession : YP_001100623.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 2347178 - 2347795 bp
Length : 618 bp
Strand : -
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACTGGAATCGTCGCCGCTGTCGGCAAAATCACTGCAATTTCCCCACTCGGCGACCAGGCTGCCGGGCATCGCCT
GACGGTGGATGCCGGCGGCTTGCCGCTGGCCGATGTCGCGCTGGGCGATTCAATCACCCTGAATGGCGCCTGCATGACAG
TGGTGGCAAAAACGGAGAGCACATTCGAGGTCGACGTGTCGCGCGAAAGCCTGAATTGCACTACCGGTCTGGATGCAATC
GGCGAAGTCAATCTGGAAAAGGCGGTGACCTTGTCCGAGCGCCTGGGCGGGCATCTGGTATCCGGCCATGTCGATGGCCT
GGGCACGGTGCAAAAATTCGAACCGGTGGGCGAGTCCTGGCTGCTGGTAGTCAAGGCGCCGAAAGAGCTGGCGAAATTCA
TCGCTGTCAAAGGCTCCATCGTCATCAACGGCGTGTCGCTCACGGTCAACACCGTTGCAGACGGTGCGGATGCATGCGAA
TTTTCTGTCAACCTGATTCCGCACACGGTGCAAGTCACCACGCTCAAGCATTTGCAGACCGGCAGCAAGGTCAATCTGGA
AATCGATTTGATCGCGCGTTATGTAGAGCGCATGCTTACATGGTCGCGCGCAGAGTAA

Protein sequence :
MFTGIVAAVGKITAISPLGDQAAGHRLTVDAGGLPLADVALGDSITLNGACMTVVAKTESTFEVDVSRESLNCTTGLDAI
GEVNLEKAVTLSERLGGHLVSGHVDGLGTVQKFEPVGESWLLVVKAPKELAKFIAVKGSIVINGVSLTVNTVADGADACE
FSVNLIPHTVQVTTLKHLQTGSKVNLEIDLIARYVERMLTWSRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 4e-31 46
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 4e-31 46