Gene Information

Name : HEAR2323 (HEAR2323)
Accession : YP_001100576.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2307246 - 2308850 bp
Length : 1605 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence :
ATGAATTTGCTGGAGATTCAAAACCTGCAGGTTTCGTTTGATACCAGCAAGGTCGTCAACGATGTTAGCTTCAGCATCGC
TGCCGGCGAAAAATTTGCACTGGTGGGTGAGTCCGGTTCGGGCAAGACTGTCACTGCGCTGTCTATTCTGCGCCTGAATC
AGGATGCCGCTTACGCCGGCAGGATACTGTTTGAAGGGCAGGACATTCTGCAAAGAAGCGAAGCTGCCATGCGTGCGGTA
CGCGGCAAGGATGTCGCGATGATTTTCCAGGAGCCGATGACAGCACTCAATCCGCTGTTTACGATCGGCAACCAGATTGC
TGAAGGTTTGATGCTGCATGAAGGCCTCAGCGCCAGAATCGCCGCCTTGCGTGCAATCGAGCTGCTCGATAAAACCGGCA
TCCCCGAGCCGCAGCGTCGCGCACTGTCGTACCCGCACCAACTATCCGGCGGCCAGCGCCAGCGCGCGATGATAGCCATG
GCGCTGGCGTGCAAGCCCAAGCTGCTGATTGCCGATGAGCCGACGACTGCTCTCGATGTGACGATACAGGTGCAGATCGT
TGAATTGCTGAACCAGCTGCAGCGTGAGGAAAACATGGCCGTGCTGATGATTACGCACGACTTGAACCTGGTGCGCCATT
TTGCCGACCGCGTAGGCGTGATGGAAAAAGGGTGCCTGGTTGAAGTGGCAGCAACCCGGGAGTTGTTTACTGCGCCGCGC
GAAACCTACACGCGGAAATTGCTGGCGAGTCAGCCGCAGCAATTGGTCAATACGCTCAACGAGTCGGCCGTACCCTTGCT
GAGTGCCGAGCATGTGCGCTGCACCTTCGATATCAAGCAAGGCTGGTTCAAGACGACGCCATTTGTGGCGGTCGATGACG
TCAGCGTGCAGGTACGCCCCGGCGAAACCCTCGGCATCGTCGGTGAATCGGGCTCCGGAAAAACGACTTTGGGGCTGGCT
TTGTTGCGGCTTTCAAGCGCCAGGGTCAGCGGTACGATCGCATTTGACGGCAAGCCGCTGAATGCGATGCAGAGCGATGC
CTTGCGGCCTTTGCGTGCGCGTATGCAAATCGTGTTTCAAGACCCGTTTGCGTCGCTGTCGCCGCGCCGTACGATCGAGC
AGATCGTCGGTGAAGGCCTGGCCCTGCATCAGCCGCAACTCGGTGCTGCCGGCATACGCAAGGCCGTAGCCGATGCCTTG
TTGGAAGTCGGTTTGCCGCCCGACATCATGGCGCGTTATCCGCATGAATTTTCCGGCGGTCAGCGGCAGCGTATTGCGAT
TGCACGGGTGCTGGTGCTGAAGCCCGATCTGGTTTTGCTGGATGAGCCGACGTCTTCACTCGATGTATCGGTACAGCAGC
AGGTGTTGCAATTGCTGCTGGAATTGCAGAAAAAATACGAACTGGCTTATATTTTCATCAGCCATGATCTGGCGGTCATA
CGCGCGATGGCGCATCGCGTCATGGTCATGAAAGACGGCAAGGTAGTGGAAAGCGGAATGACGCAGGCGGTGTTGTCACA
ACCGACAGAGGCCTACACGCAGCGATTGCTGGCAGCTTCGGTCTATGCGGCGGCGGATGAAGAAGCGACAGCCGTGCAAG
CCTGA

Protein sequence :
MNLLEIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSILRLNQDAAYAGRILFEGQDILQRSEAAMRAV
RGKDVAMIFQEPMTALNPLFTIGNQIAEGLMLHEGLSARIAALRAIELLDKTGIPEPQRRALSYPHQLSGGQRQRAMIAM
ALACKPKLLIADEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGCLVEVAATRELFTAPR
ETYTRKLLASQPQQLVNTLNESAVPLLSAEHVRCTFDIKQGWFKTTPFVAVDDVSVQVRPGETLGIVGESGSGKTTLGLA
LLRLSSARVSGTIAFDGKPLNAMQSDALRPLRARMQIVFQDPFASLSPRRTIEQIVGEGLALHQPQLGAAGIRKAVADAL
LEVGLPPDIMARYPHEFSGGQRQRIAIARVLVLKPDLVLLDEPTSSLDVSVQQQVLQLLLELQKKYELAYIFISHDLAVI
RAMAHRVMVMKDGKVVESGMTQAVLSQPTEAYTQRLLAASVYAAADEEATAVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-62 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-62 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-62 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-62 41