|
Name : HEAR2323 (HEAR2323) Accession : YP_001100576.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2307246 - 2308850 bp Length : 1605 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGAATTTGCTGGAGATTCAAAACCTGCAGGTTTCGTTTGATACCAGCAAGGTCGTCAACGATGTTAGCTTCAGCATCGC TGCCGGCGAAAAATTTGCACTGGTGGGTGAGTCCGGTTCGGGCAAGACTGTCACTGCGCTGTCTATTCTGCGCCTGAATC AGGATGCCGCTTACGCCGGCAGGATACTGTTTGAAGGGCAGGACATTCTGCAAAGAAGCGAAGCTGCCATGCGTGCGGTA CGCGGCAAGGATGTCGCGATGATTTTCCAGGAGCCGATGACAGCACTCAATCCGCTGTTTACGATCGGCAACCAGATTGC TGAAGGTTTGATGCTGCATGAAGGCCTCAGCGCCAGAATCGCCGCCTTGCGTGCAATCGAGCTGCTCGATAAAACCGGCA TCCCCGAGCCGCAGCGTCGCGCACTGTCGTACCCGCACCAACTATCCGGCGGCCAGCGCCAGCGCGCGATGATAGCCATG GCGCTGGCGTGCAAGCCCAAGCTGCTGATTGCCGATGAGCCGACGACTGCTCTCGATGTGACGATACAGGTGCAGATCGT TGAATTGCTGAACCAGCTGCAGCGTGAGGAAAACATGGCCGTGCTGATGATTACGCACGACTTGAACCTGGTGCGCCATT TTGCCGACCGCGTAGGCGTGATGGAAAAAGGGTGCCTGGTTGAAGTGGCAGCAACCCGGGAGTTGTTTACTGCGCCGCGC GAAACCTACACGCGGAAATTGCTGGCGAGTCAGCCGCAGCAATTGGTCAATACGCTCAACGAGTCGGCCGTACCCTTGCT GAGTGCCGAGCATGTGCGCTGCACCTTCGATATCAAGCAAGGCTGGTTCAAGACGACGCCATTTGTGGCGGTCGATGACG TCAGCGTGCAGGTACGCCCCGGCGAAACCCTCGGCATCGTCGGTGAATCGGGCTCCGGAAAAACGACTTTGGGGCTGGCT TTGTTGCGGCTTTCAAGCGCCAGGGTCAGCGGTACGATCGCATTTGACGGCAAGCCGCTGAATGCGATGCAGAGCGATGC CTTGCGGCCTTTGCGTGCGCGTATGCAAATCGTGTTTCAAGACCCGTTTGCGTCGCTGTCGCCGCGCCGTACGATCGAGC AGATCGTCGGTGAAGGCCTGGCCCTGCATCAGCCGCAACTCGGTGCTGCCGGCATACGCAAGGCCGTAGCCGATGCCTTG TTGGAAGTCGGTTTGCCGCCCGACATCATGGCGCGTTATCCGCATGAATTTTCCGGCGGTCAGCGGCAGCGTATTGCGAT TGCACGGGTGCTGGTGCTGAAGCCCGATCTGGTTTTGCTGGATGAGCCGACGTCTTCACTCGATGTATCGGTACAGCAGC AGGTGTTGCAATTGCTGCTGGAATTGCAGAAAAAATACGAACTGGCTTATATTTTCATCAGCCATGATCTGGCGGTCATA CGCGCGATGGCGCATCGCGTCATGGTCATGAAAGACGGCAAGGTAGTGGAAAGCGGAATGACGCAGGCGGTGTTGTCACA ACCGACAGAGGCCTACACGCAGCGATTGCTGGCAGCTTCGGTCTATGCGGCGGCGGATGAAGAAGCGACAGCCGTGCAAG CCTGA Protein sequence : MNLLEIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSILRLNQDAAYAGRILFEGQDILQRSEAAMRAV RGKDVAMIFQEPMTALNPLFTIGNQIAEGLMLHEGLSARIAALRAIELLDKTGIPEPQRRALSYPHQLSGGQRQRAMIAM ALACKPKLLIADEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGCLVEVAATRELFTAPR ETYTRKLLASQPQQLVNTLNESAVPLLSAEHVRCTFDIKQGWFKTTPFVAVDDVSVQVRPGETLGIVGESGSGKTTLGLA LLRLSSARVSGTIAFDGKPLNAMQSDALRPLRARMQIVFQDPFASLSPRRTIEQIVGEGLALHQPQLGAAGIRKAVADAL LEVGLPPDIMARYPHEFSGGQRQRIAIARVLVLKPDLVLLDEPTSSLDVSVQQQVLQLLLELQKKYELAYIFISHDLAVI RAMAHRVMVMKDGKVVESGMTQAVLSQPTEAYTQRLLAASVYAAADEEATAVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-62 | 41 |
