Gene Information

Name : lolD (HEAR2223)
Accession : YP_001100481.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.25
Position : 2225355 - 2226041 bp
Length : 687 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10783239; Product type t : transporter

DNA sequence : 
ATGAGTGAACATGTACTGGCTTGCCGCGATCTTGCGAAGACTTTCACGCAAGGGAAATATGCGGTCGATGTATTGAAAGG
CATCAACCTGGATATCGTCAAGGGCGAACGGGTGGCGATCGTCGGTGCCTCGGGTTCGGGCAAATCGACCCTGCTGCATT
TACTTGGTGGACTGGATACGCCGAGCGCCGGTTCGGTGACTTTGCTGCATCAGGATTTTGCCAGCCTGGATGAAAAAACG
CGCGGCAATCTGCGCAATCGCTCGCTGGGTTTCGTGTATCAATTCCACCATCTGCTGCCGGAGTTTTCTGCGCTGGATAA
TGTTGCGATGCCGCTGATGATACGGCGCGTACCGCGAGAGCAAGCGCATGAAACGGCGCGCGCGATACTGGCGCGGGTCG
GCCTCGAACATCGCGTCACGCATGTGCCAGGTGAATTGTCCGGCGGCGAACGCCAGCGCGTGGCGCTAGCGCGCGCACTG
GTGACGCAGCCGGCCTGTGTGCTGGCCGATGAGCCGACCGGGAACCTGGATCGGCACACGGCGCACAAGACTTTCGACCT
GATGCTGGAGTTGTCGCGCACGCTGGGCACGGCATTCGTGATTGTCACGCACGATATCGAACTGGCGACGCACTGCGACC
GCATCCTGCGTTTGTCTGACGAAGGATTGCAACCGTATAGCGATTGA

Protein sequence : 
MSEHVLACRDLAKTFTQGKYAVDVLKGINLDIVKGERVAIVGASGSGKSTLLHLLGGLDTPSAGSVTLLHQDFASLDEKT
RGNLRNRSLGFVYQFHHLLPEFSALDNVAMPLMIRRVPREQAHETARAILARVGLEHRVTHVPGELSGGERQRVALARAL
VTQPACVLADEPTGNLDRHTAHKTFDLMLELSRTLGTAFVIVTHDIELATHCDRILRLSDEGLQPYSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001100481.1 lipoprotein releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 1e-32 44
lolD YP_001100481.1 lipoprotein releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 5e-38 43