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Name : clpB (HEAR2144) Accession : YP_001100404.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Virulence Product : ATP-dependent protease Hsp 100 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2146040 - 2148622 bp Length : 2583 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2185473, 2066329, 8376377, 11061966, 14978298, 15208691, 11717522; Product type f : factor DNA sequence : ATGCGTCTCGATAAATTGACCACCAAGTTGCAAGAAGCCCTCGCCGATGCCCAGAGCCATGCAGTCGGCAACGATAACCA ATACATAGAACCAGTCCACGTACTTGTCGCACTGCTGAGCCAGGACGACAGCAGCACGCGCTCGTTGCTGCAACGCGCGG GGGCCAACATCAATGGCATGGTGACAGCGCTGAAAAGTGCACTGGAGCGCCTGCCCAAAGTCTCAGGCACTGGTGGCCAG GTGCAGATCAGCCGTGATCTGACTGCGCTCCTGAATCTGGCGGACAAAGAATCGCAGATGCACGGCGACGAGTTCATCGC CACGGAAATGCTTTTGCTGGCACTGACCGAAGACAAGTCCGAGGCCGGCAAGATCGCGCGCGAGAACGGTTTGACGCGCA AGGCGCTGCAAGCCGCGATCAAGGCGGTGCGCGGCAGCTCGAAAGTCGATTCCGCCGAAGGCGAAGGCCAGCGCGAAGCG CTCAAAAAATACACGATGGACCTGACCGAGCGCGCACGTATCGGCAAGCTCGATCCGGTCATCGGCCGCGATGATGAAAT CCGCCGCACCATCCAGATCCTGCAACGTCGCTCCAAAAACAATCCGGTATTGATCGGTGAACCAGGCGTGGGCAAAACCG CCATCGTTGAAGGTTTGGCACAACGCATCGTCAACGGCGAAGTGCCTGAAAGCCTCAAGGGAAAACGCGTGCTGTCGCTT GACATGGCATCGCTGCTGGCGGGCGCCAAATATCGCGGCGAGTTTGAAGAACGCCTGAAAGCGGTGTTGACCGAACTTGC GGAGGACGAAGGCCAGACCATTGTCTTCATCGACGAAATGCATACGCTGGTGGGAGCCGGCAAGGCAGAAGGCGCAATGG ATGCCGGCAATATGCTCAAGCCGGCATTGGCGCGTGGCGAACTGCACTGCGTCGGCGCGACCACGCTGGACGAATACCGC AAATACATCGAGAAAGATGCCGCGCTGGAACGCCGCTTTCAAAAAGTGCTCGTGGATGAGCCAACGGTGGAAGCGACTAT CGCCATCCTGCGCGGCCTGCAGGAAAAATACGAAGTCCATCATGGTGTCGACATCACGGATCCGGCCATCGTCGCTGCCG CAGAACTGTCGCATCGCTACATTACCGACCGCTTTCTGCCTGACAAGGCGATTGACCTGATCGATGAAGCGGCGGCCAAG ATCAAGATCGAGATCGATTCCAAGCCGGAAGTCATGGATCGGCTGGATAGACGCGTCATTCAACTGAAGATAGAACGCGA AGCGATCAGGAAAGAGAAAGACGAAGCATCGCAAAAACGTCTGGCCCTGATTGAAGAGGAAATCGAAAAACTCGGGCGTG AATATGCCGATCTGGAAGAAATCTGGAAAGCCGAGAAATCCGCTGCGCAAGGCAGCCAGCACATCAAGGAAGCGATAGAG AAAGCCCGTCTGCAGATGGAAGAAGCCACGCGTCAAAGCGACTGGCAGCGTGTGTCTGAACTGCAGTACAAAACACTGCC GGAACTGGAAGCGCAACTGAAGAATGCTGTCACTGGCGAAGCCAGCGCAGGCAAACCGCAACTCGTACGCACCCAGGTCG GTGCGGAAGAAATCGCCGAAGTTGTTTCGCGCGCAACCGGTATTCCTGTTTCGCGCATGATGCAGGGCGAACGCGAGAAG CTGCTGCAGATGGAAGACGCATTGCACAAGCGCGTGGTCGGTCAGCATGAAGCAATTGTTGCCGTGTCGGATGCGATTCG TCGTTCGCGCGCGGGTCTCGGCGATCCGGATCGTCCTTACGGCTCCTTCATGTTCCTCGGCCCAACCGGTGTCGGTAAAA CCGAGTTGTGCAAGGCGCTGGCTTCCTTCCTGTTCGATACAGAAGATTCGCTGGTCCGCATCGACATGAGCGAATTCATG GAGAAGCATTCGGTGGCCCGCCTGATCGGTGCGCCGCCGGGTTATGTCGGCTATGAAGAAGGCGGCTATCTGACCGAAGC CGTGCGGCGCAAACCGTACTGCGTGATCCTGCTCGACGAAATCGAGAAGGCGCATCCCGATGTGTTCAACGTCCTGCTGC AAGTGCTGGACGATGGCCGCATGACGGATGGACAAGGCCGTACCGTCGACTTCAAGAACACCGTCATCGTGATGACATCG AATCTGGGTTCGCACAAGATTCAGGCGATGGAAGGCAACGAGCCGGCATTGATCAAGATGGCGGTGATGGCGGAAGTGCA GTCGCATTTCCGTCCCGAATTCATCAACCGTATCGACGAGATCGTGGTGTTCCACGCGCTTGATGAGAAAAACATCGGCG CGATTGCCAAGATCCAGCTGCACACGCTGGAACAACGTCTGGCACGTATGGATATGTCTATGGATGTATCGGAAGATGCA TTGCAGAAAATCGCAGAAGCCGGCTTCGATCCTGTGTATGGCGCACGTCCGTTGAAGCGTGCGATTCAGCAGCAGATTGA AAATCCCTTGTCCAAGGCGATCCTGGAAGGAAAGTTCGGGCCCAAGGATGTGATTTCGGTTGATGTGAAAAATGGCGAAC TGGAGTTCGCCAAAGCGCAGTAA Protein sequence : MRLDKLTTKLQEALADAQSHAVGNDNQYIEPVHVLVALLSQDDSSTRSLLQRAGANINGMVTALKSALERLPKVSGTGGQ VQISRDLTALLNLADKESQMHGDEFIATEMLLLALTEDKSEAGKIARENGLTRKALQAAIKAVRGSSKVDSAEGEGQREA LKKYTMDLTERARIGKLDPVIGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSL DMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAK IKIEIDSKPEVMDRLDRRVIQLKIEREAIRKEKDEASQKRLALIEEEIEKLGREYADLEEIWKAEKSAAQGSQHIKEAIE KARLQMEEATRQSDWQRVSELQYKTLPELEAQLKNAVTGEASAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMQGEREK LLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFLFDTEDSLVRIDMSEFM EKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTS NLGSHKIQAMEGNEPALIKMAVMAEVQSHFRPEFINRIDEIVVFHALDEKNIGAIAKIQLHTLEQRLARMDMSMDVSEDA LQKIAEAGFDPVYGARPLKRAIQQQIENPLSKAILEGKFGPKDVISVDVKNGELEFAKAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001100404.1 | ATP-dependent protease Hsp 100 | VFG0079 | Protein | 6e-153 | 46 |
| clpB | YP_001100404.1 | ATP-dependent protease Hsp 100 | VFG2084 | Protein | 7e-97 | 41 |
