Gene Information

Name : rph (HEAR2126)
Accession : YP_001100386.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : RNase PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2125659 - 2126393 bp
Length : 735 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1885537, 1512252, 1512253; Product type e : enzyme

DNA sequence :
ATGTCGTATGAAAATCGTCCCAGCGGACGCGCCGCTGATGCCTTGCGCGCAATCAAATTTATCCGCAATTACACCAAGCA
TGCCGAAGGTTCCGTACTGATTGAATGCGGCGACACCAAAGTCATCTGCACCGCGAGTATCGAAGATCGCGTACCCGGAT
TTTTAAAAGGCAAAGGCCAGGGCTGGCTGACAGCGGAATACGGCATGCTGCCGCGCTCGACGCATACGCGCATGGATCGC
GAAGCGGCACGCGGCAAGCAGTCCGGTCGCACGCAGGAAATTCAACGCCTGATCGGCCGTTCCCTGCGCGCAGCATTTGA
TCTGCAGGCGTTTGGCGAACGTACGCTGCATCTGGATTGCGACGTCATCCAGGCTGACGGCGGTACGCGTACTGCCGCGA
TCACCGGCACCATGGTTGCCGCCTACGATGCTTTCAGCAAGCTGGTGGCGCAGAATGTGATTCCTGCCATCCCGCTCAAG
CATTTTGTCGCGGCGATTTCGGTCGGCGTCTACAAAGGACAGCCCGTGCTGGATCTTGATTACGACGAAGATTCGGATTG
CGATACCGATATGAACATCGTCATGACCGATGCCGGCCACTTCATTGAAGTGCAGGGTACGGCGGAAGGTGCGGCCTTCG
ATCGCGCCACGATGGATCGCCTGCTGGATCTGGCGCAAGACGGCATCCGCGACCTGATCGTGATGCAAAAACAGGCCTTG
GCGATTGCTGCGTAA

Protein sequence :
MSYENRPSGRAADALRAIKFIRNYTKHAEGSVLIECGDTKVICTASIEDRVPGFLKGKGQGWLTAEYGMLPRSTHTRMDR
EAARGKQSGRTQEIQRLIGRSLRAAFDLQAFGERTLHLDCDVIQADGGTRTAAITGTMVAAYDAFSKLVAQNVIPAIPLK
HFVAAISVGVYKGQPVLDLDYDEDSDCDTDMNIVMTDAGHFIEVQGTAEGAAFDRATMDRLLDLAQDGIRDLIVMQKQAL
AIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-57 56