|
Name : HEAR2005 (HEAR2005) Accession : YP_001100272.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 2013321 - 2015507 bp Length : 2187 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGTCGGGGAAACAGCCGGTCGAGGTTCTGCTTCGCCCAGCGGTGGAGCTATATACCGTCGCGGCGTGTGCAGGCGCCGC GTTTCTGTCCCTGGTGGCCCCGTGGTCGCTCGCGCTGAGCCCCGCCATGGGTGTCGGCAGCGCGCTGGCGTTCGGAGCCT ATGGCGCGATCCGCTACCGCGATGCCCGCGTCATCCTGTGCTACCGGCGCAACATCCGTCGCCTGCCGCGCTACGTGATG ACCAGCAAGGACGTGCCGGTCAGCCAGCAACGTCTGTTTGTGGGACGCGGCTTTCTGTGGGAGCAGAAACACACCCATAG GCTCATGCAGACGTACCGGCCAGAGTTTCGGCGCTACGTCGAGCCGACGCCGGCCTATCGGCTGGCCCGGCGCCTGGAGG AACGGCTGGAGTTCGCGCCGTTCCCGCTGTCCCGGCTATCGAAACTCACCGGCTGGGACGTGCCTTTCAATCCGGTGCGG CCGCTGCCGCCAGTGGGCGGCCTGCCGCGCCTGCACGGCATCGAACCCGACGAGGTGGACGTCAGCCTGCCGCTGGGTGA GCGCGTGGGCCACTCCTTGGTTTTGGGAACGACAAGGGTGGGCAAAACACGTTTGGCCGAACTCTTCGTCACTCAAGACA TCCGCCGGAGGAACGCCGCGGGCGAACACGAGGTCGTGATCGTCATCGACCCCAAAGGAGATGCCGATCTCCTGAAGCGG ATGTATGTCGAGGCCAAGCGCGCGGGCCGCGAAGGCGAGTTCTATGTCTTCCATTTGGGGTGGCCGGACATTTCGGCACG CTACAACGCCGTAGGCCGATTCGGTCGCATCTCGGAAGTCGCCACCCGCATCGCGGGGCAGCTCTCCGGCGAAGGCAACA GCGCAGCCTTCAGGGAATTCGCGTGGCGCTTCGTCAACATCATTGCCCGCGCCTTGGTGGAACTGGGGCAGCGCCCGGAC TACATGCTGATCCAGCGGCACGTCATCAACATCGACGCGCTGTTCATCGAGTACGCCCAGCACTACTTCGCCAAGACCGA GCCCAAAGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCGCGCAACATGATTGGGCGCG AGAAGCGCGTGGTGGCGCTGGAGCAGTACCTATCCCAGGCCCGTAACTACGACCCGGTGCTCGACGGCCTGCGCTCGGCG GTTCGCTACGACAAGACGTATTTCGACAAGATCGTCGCGTCTTTGCTGCCGCTGCTGGAGAAGCTCACCAGCGGGAAGAT TTCCCAGCTTCTGGCGCCGAACTATTCCGACCTGGCCGACCCCCGCCCGATCTTCGATTGGATGCAGGTCATCCGAAAGC GCGCAGTCGTCTATGTGGGCCTGGACGCGCTATCCGATGCCGAGGTCGCCGCAGCGGTCGGCAACTCGATGTTCAGCGAT CTCGTTTCGGTGGCAGGCCATATCTACAAGCACGGGATCGATGACGGCCTGCCGGGCGCATCGGCTGGCACGCGCGTGCC GATCAACGTCCACGCGGATGAATTCAATGAACTGATGGGTGACGAGTTCGTGCCGCTGATCAACAAAGGCGGCGGCGCCG GTCTGCAGGTCACCGCGTACACGCAGACGCTTTCGGACATCGAGGCCCGTATCGGGAACCGCGCCAAAGCGGGTCAAGTG ATTGGCAATTTCAACAATCTGTTCATGCTGAGGGTCAGGGAGACGGCCACCGCCGAACTGCTGACCCGGCAATTGCCGAA GGTCGAGGTCTATACGACCACCATCGTCTCCGGCGCGACCGACAGCTCGGACATCCGCGGCGCGACGGACTTCACCAGCA ACACGCAGGACCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCGTCGCACGTCGTCGCCTTACCCAAGGGCCAATGT TTCGCATTGTTGCAGGGCGGCCAGCTTTGGAAGGTTCGCATGCCGCTGCCGGCACCGGACCCCGATGAGGTCATGCCGCA GGATCTGCAACAACTGGCGGGCTACATGCGCCAGAGCTACAGCGAGGCCACGCAGTGGTGGGAGTTCACCAGTTCCCCGG CGTTGCAGGACGGGGCCTTGCCCGACGACCTGTTGGATGATGCCGCTGCGGCCGAACCTGGCCCGGTGGCCACCGACGAC AGCGCCGGCAATGAGGCCTCGCCATGA Protein sequence : MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYRDARVILCYRRNIRRLPRYVM TSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVEPTPAYRLARRLEERLEFAPFPLSRLSKLTGWDVPFNPVR PLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRRNAAGEHEVVIVIDPKGDADLLKR MYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD YMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSA VRYDKTYFDKIVASLLPLLEKLTSGKISQLLAPNYSDLADPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSD LVSVAGHIYKHGIDDGLPGASAGTRVPINVHADEFNELMGDEFVPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV IGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVALPKGQC FALLQGGQLWKVRMPLPAPDPDEVMPQDLQQLAGYMRQSYSEATQWWEFTSSPALQDGALPDDLLDDAAAAEPGPVATDD SAGNEASP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 98 |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 89 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 0.0 | 74 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 0.0 | 71 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 70 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 70 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 63 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 0.0 | 63 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 62 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 62 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 62 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 0.0 | 62 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 0.0 | 60 |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 1e-130 | 48 |
