Gene Information

Name : HEAR1987 (HEAR1987)
Accession : YP_001100255.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1997499 - 1998326 bp
Length : 828 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTCTCTGGCATCCCGTTTTGCTCCGCAATCCCCGATCCTGCGCTCCGATCGCCCACTCTCGGACGACCGTATTCGTGC
CGTTGTTCCCTCGATCTTTGCCGACGCTCCGCATGGGAGCCGGTCCGATCGGTATGCCTACATACCGACCTCGGTCGTGC
TGACCAGGTTGCGCCAGGAGGGTTTCGAGCCCTTCATGGTGTGCCAGACGCGCGTGCGCAACGAGGATCGGCGCGAGTAC
ACCAAGCATCTCATCCGACTTCGCCATGCAAGCCAGATCAACGGCGACGAGGCGAACGAGATCATCCTGCTCAACAGCCA
CGACGGCACGAGCAGCTACCAGATGCTTGCCGGCATGTTCCGGTTCGTCTGCCACAACGGCCTGGTCTGCGGTGACACCA
CCGCCGACATCCGCGTTCCTCACAAGGGCGACGTGGCAAGCCAGGTGATCGAAGGTGCCTACGAGGTTCTCGAAGGCTTC
GAGCGCGTGCAGGACGCGCGCGATGCGATGCGCACCATCACCCTCGATGAGGGCGAAGCGGAAATCTTTGCGAATTCCGC
GCTCGCACTCAAGTACGACGACCCGGCCAAGTCCACCCCTGTCACGGAGAGCCAACTTCTGGCGCCCAGGCGCTGGGACG
ACCGCAAGAACGACCTGTGGGCCGTCTTCAACCGCGTCCAGGAGAACCTCGTCAAAGGGGGACTGAATGGACGCTCGGCC
AATGGCCGCAATCAACGCACCCGTCCGGTGCAAGGAATCGACCAGAACCTGCGCCTGAACCGGGCGTTGTGGCTGCTGGC
CGAAGGCATGCGCCAGCTCAAGGCGTGA

Protein sequence :
MSLASRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSVVLTRLRQEGFEPFMVCQTRVRNEDRREY
TKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYEVLEGF
ERVQDARDAMRTITLDEGEAEIFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRSA
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-118 98
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 5e-101 79
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-68 54
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 8e-68 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 8e-68 53
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-69 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 8e-68 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 5e-67 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-66 52
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-66 52
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-66 52
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-66 52
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-66 52
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 5e-67 52
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-67 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 5e-67 52
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-67 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HEAR1987 YP_001100255.1 hypothetical protein VFG1526 Protein 5e-68 53
HEAR1987 YP_001100255.1 hypothetical protein VFG1615 Protein 1e-66 52
HEAR1987 YP_001100255.1 hypothetical protein VFG1676 Protein 4e-66 52
HEAR1987 YP_001100255.1 hypothetical protein VFG0658 Protein 4e-67 52