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Name : glcA (HEAR1916) Accession : YP_001100190.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : LctP family glycolate permease Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 1926764 - 1928437 bp Length : 1674 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11785976; Product type e : enzyme DNA sequence : ATGATATGGCAACAAATCTACGATCCGCTTAACAGCTTCGGTTTCTCTACACTGGCAGCCGGCATTCCGGTTGCAGTGCT GCTGGCGGCACTGGCATTCTTCCATATGAAGGCTCACCTCGCCGCCGGCCTTGCACTCGTCGTCGGCATCGCGATTGCCG CTCTTGTATTCGGCATGCCGGTGGCCATGGCCGGCAAGGCAGCCGGTTACGGTATTGCTGCAGGCTTGTTCCCGATCGGC TGGATCGTGCTGAACATTATCTTCCTGCATCGCCTGACGACGCTGAACGGATATTTCAAGGTATTGCAAAACAGCATAGG CGGCATCACTGAAGATCGTCGCCTGCAATTGCTGCTGGTTGCCTTCTGTTTCGGCGCGTTCTTTGAAGGCGCTGCAGGTT TCGGTACACCGGTTGCTGTAACGGGCGCGATCCTGATCGGTCTCGGCTTCTCGCCGCTGGCTGCTTCCGGCCTAGCACTG ATCGCCAACACCGCTCCAGTTGCCTACGGCGCACTGGGTGCACCGGTGATCGCACTGGCTTCCGTGACCGGCATCGACGT ACTGGATCTGTCTGCAATGATCGGACGCCAACTGCCTTTCTTCTCGGTACTGGTGCCGTTCTGGCTGATCTGGGCATTTG CCGGCTTCCGCGGCATGCGTGAAATCTGGCCGGCAATTCTGGTGGCTGGCGCATCGTTTGCCATTCCGCAATTTCTGGTT TCCAACTATCACGGCCCATGGCTGGTTGACGTCATTGCCGCCATTGTGTCGATGGGCGCACTGACGCTGTTCCTGAAAGT ATGGCAACCAAAGAAAATCTGGACCTCGACTGCCCTGCGTAATCGCAACGACAATTCCAAGGACGACATCAAGGATGAGC CCGTCACCGCGGACAATACTGCCACTGCCAACATTACCGTTGCCAAATCGTGGATGCCTTGGGTGATTCTGTCTGTCTTC GTATTCGTCTGGGGTACACCGTTCTTCAAGAAGGCCATTGATGCAGTCTGGTCGTGGAAGTATGCGATTCCCGGCCTCGA CAAGATGGTCATGAAGATGCCGCCAGTGGCCAAGGAACCATTCGTCGAAGCGGCCGTATATAACTTCAACATTCTTTCAA TGGCTGGCACCGGCATTCTGGTTTCTTCCATCGTGGCAGGTGCGTTGATGGGTTATTCCTTCCGCCGCATGCTCAAGGAA TACTGGAACACCATCGTACTGGTACGTTATTCGCTCATGACCATTTGCGCGATGTTCGCTGTCGGTTACCTGAGCAAATA CGCAGGTCTGGATGCAACTCTCGGCCTGGCATTTGCGCATACCGGCGTGTTCTATCCGATGTTCGGTACCCTGCTAGGCT GGCTGGGCGTGGCGCTGACCGGTTCGGATACTGCTGCCAACGTCTTGTTCGGCAGCCTGCAAAAAACGACTGCTGAACAA CTGGGCCTGCCACCAGTGCTGATGGCATCCGCCAACAGCGCGGGCGGCGTGATGGGCAAGATGATCGATGCGCAATCGAT TGTGGTCGCCTCTACCGCAACCAAATGGTATGGCCACGAGGGCGACATTCTGCGCTACGTGTTCTTCCACTCGATCGCTC TGGCCATCCTGGTCGGCTTCCTGGTGACGCTGCAGGCTTATGTGATTCCATTCACGTATATGGTCGTCAAATAA Protein sequence : MIWQQIYDPLNSFGFSTLAAGIPVAVLLAALAFFHMKAHLAAGLALVVGIAIAALVFGMPVAMAGKAAGYGIAAGLFPIG WIVLNIIFLHRLTTLNGYFKVLQNSIGGITEDRRLQLLLVAFCFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLAL IANTAPVAYGALGAPVIALASVTGIDVLDLSAMIGRQLPFFSVLVPFWLIWAFAGFRGMREIWPAILVAGASFAIPQFLV SNYHGPWLVDVIAAIVSMGALTLFLKVWQPKKIWTSTALRNRNDNSKDDIKDEPVTADNTATANITVAKSWMPWVILSVF VFVWGTPFFKKAIDAVWSWKYAIPGLDKMVMKMPPVAKEPFVEAAVYNFNILSMAGTGILVSSIVAGALMGYSFRRMLKE YWNTIVLVRYSLMTICAMFAVGYLSKYAGLDATLGLAFAHTGVFYPMFGTLLGWLGVALTGSDTAANVLFGSLQKTTAEQ LGLPPVLMASANSAGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAILVGFLVTLQAYVIPFTYMVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 1e-86 | 44 |
