|
Name : kdpB (HEAR1625) Accession : YP_001099910.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : copper transporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.4 Position : 1621254 - 1623347 bp Length : 2094 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6146979; Product type t : transporter DNA sequence : ATGCCGGAAATCAAGGCGACGCCTGTCGTGTCACGGAAAAGCCTGACGCTTTTCGATACGGCCATGATAGGTCCTGCCAT AGTCGATGCATTCAAAAAACTGACGCCACGCGCACAGTGGCGCAGTCCGGTGATGTTTGTTGTCTATGTCGGCAGCATCA TCACGACCTTGCTGTTCATTCAATCGTTGATCGGACAAGGCGAAGCGAATTCCGGATTTATCGCTGCCATTTCCATCTGG TTATGGTTCACCGTGTTGTTCGCCAACTTCGCCGAATCATTGGCGGAAGGGCGCAGCAAGGCACAAGCCGCATCGTTGCG CGCCTTGAAGCAAACCGTGCTGGCGAAGAAACTCGCTACACCCAAACATGGCACAACGTGGCTGCCTGCATCGCCTGCCG ATTTGCGCAAGGGCGATACCGTACTGGTTGAAGCCGGCGATGTGATTCCAGTCGATGGTGAAGTAATCGAAGGCGTGGCC TCGGTCGATGAAAGCGCGATTACCGGCGAATCGGCTCCGGTCATTCGTGAGTCGGGTGGAGACTTTTCATCTGTCACTGG CGGCACCCGCGTGCTGTCCGACTGGCTGGTGGTACGCATTGCGGTCAATCCCGGCGAGGCGTTTATCGATCGCATGATTG CGATGGTTGAAGGTGCCAAGCGTCAGAAAACGCCGAATGAAATTGCACTGACGATTTTACTGGTCGCGCTGACCATCATC TTCCTGATCGTGACGGTCACCTTGTTGCCGTTTTCGCTGTACTCGGTGCAAGTCGCTGGAGCCGGCACGCCGATCACGAT CACCGTGTTGATCGCCTTGCTGGTCTGCCTGATCCCGACCACCATCGGCGGTTTGCTGTCGGCTATCGGTGTGGCCGGCA TGAGCCGCATGATGCAAGCCAACGTAATCGCCACGTCGGGCCGCGCAGTAGAAGCGGCGGGCGATGTCGATGTGCTGTTG CTGGATAAAACCGGCACCATCACACTCGGCAATCGTCAGGCCTCCGAGTTTTATCCGGCGCCTGGCATTACGCAAATCCA GTTGGCCGATGTCGCGCAACTGGCTTCGCTGGCCGATGAAACACCGGAAGGCCGCAGCATCGTCATCCTTGCCAAGCAGC AGTACAACATACGCGAACGCGATATCGCGGCATTGAATGCACACTTCGTTCACTTCAGTGCGCAAACACGCATGAGCGGC GTCGATATGGGCGAGCGCGTGATACGCAAAGGTGCTGCCGATACGGTGAAAAAACATATCGAATTGCTTGGCCGCTCGTT CCTGATCGAAGTATCCAATACGGTGGATGACATTTCACGCAGAGGCAGTACGCCCCTGGTGGTGGTCGACGATGGCCGCG TGATGGGTGTGGTCGAGCTGAAAGATATCGTCAAGGGTGGCATCAAGGAGCGCTTCGCCGAATTGCGTCGCATGGGCATC AAGACCGTGATGATCACCGGTGACAACAAGCTGACAGCGGCAGCGATTGCGGCCGAAGCTGGCGTTGACGATTTTCTGGC GGAAGCGACGCCGGAGCAGAAGCTCAAGCTGATCCGCGAATATCAGTCGCAAGGCCGTCTGGTCGCGATGACCGGCGACG GCACCAACGATGCACCGGCGCTGGCGCAGGCTGACGTCGCGGTGGCGATGAATTCCGGCACGCAGGCCGCGAAGGAAGCC GGCAATATGGTTGATCTGGATTCCAATCCGACCAAGCTGCTGGAGATTGTCGAGATCGGCAAGCAGATGCTGATGACGCG CGGTTCGCTGACCACGTTCTCGATCGCCAATGATGTCGCCAAATACTTCGCCATCATCCCGGCCGCATTTGTCACGACCT ATCCGCAACTGAAGGCGCTCGACATCATGCAGTTGAGCAGTCCGTCATCGGCCATCATGTCGGCCGTGATTTTCAACGCG CTGATCATTGTCGTGCTGATCCCGCTGGCATTGAAGGGCGTCAAGTATCGCGCCGTCGGTGCGGCTGCGCTGCTGCGTCG CAATATGCTGATCTATGGCCTGGGCGGCATTCTGGTGCCTTTCGTCGGCATCAAGCTGATCGACATGATCCTGACCGTTT TCGGTCTTATCTAA Protein sequence : MPEIKATPVVSRKSLTLFDTAMIGPAIVDAFKKLTPRAQWRSPVMFVVYVGSIITTLLFIQSLIGQGEANSGFIAAISIW LWFTVLFANFAESLAEGRSKAQAASLRALKQTVLAKKLATPKHGTTWLPASPADLRKGDTVLVEAGDVIPVDGEVIEGVA SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLVVRIAVNPGEAFIDRMIAMVEGAKRQKTPNEIALTILLVALTII FLIVTVTLLPFSLYSVQVAGAGTPITITVLIALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLL LDKTGTITLGNRQASEFYPAPGITQIQLADVAQLASLADETPEGRSIVILAKQQYNIRERDIAALNAHFVHFSAQTRMSG VDMGERVIRKGAADTVKKHIELLGRSFLIEVSNTVDDISRRGSTPLVVVDDGRVMGVVELKDIVKGGIKERFAELRRMGI KTVMITGDNKLTAAAIAAEAGVDDFLAEATPEQKLKLIREYQSQGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEA GNMVDLDSNPTKLLEIVEIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFVTTYPQLKALDIMQLSSPSSAIMSAVIFNA LIIVVLIPLALKGVKYRAVGAAALLRRNMLIYGLGGILVPFVGIKLIDMILTVFGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-171 | 64 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-171 | 64 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-135 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-134 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-134 | 54 |
