Gene Information

Name : HEAR1617 (HEAR1617)
Accession : YP_001099902.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Resistance
Product : transcriptional regulator CadR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1612586 - 1613041 bp
Length : 456 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11282588; Product type r : regulator

DNA sequence : 
ATGACACTGCAAATACTGAAAATCGGCGAACTGGCAGCGCAAACCGGTTCCTCGGTAGAGACCATACGTTATTACGAACA
GCAAAATCTGTTGCCGCAGCCGGCTCGTTCCGCTGGCAATTACCGGATTTACGGCGAGGCGCATGTCAAACGCCTGCAAT
TCATCCGCCACTGCCGTTCGCTCGACATGACGCTGGATGAAATCCGCACCTTGCTGAATTTTCGCGACACGCCGGAAGAA
AACTGTGCCGGCGTCAATACGCTGCTGGACAAGCATATCGGCCACGTTGCAGACCGCATCAGGGAGCTGAAAGCGTTGCA
GGTGCAATTGCAGGAGTTGCGCAGTCGCTGCCTGACGGTCCAGTCGACACAGGCATGCGGCATTCTGCAAGGCCTGGCGA
ATGCCGATGATATTGATCCCAGGAATCTGGGCTCCCATTCCGGCGGTTGTCATTAA

Protein sequence : 
MTLQILKIGELAAQTGSSVETIRYYEQQNLLPQPARSAGNYRIYGEAHVKRLQFIRHCRSLDMTLDEIRTLLNFRDTPEE
NCAGVNTLLDKHIGHVADRIRELKALQVQLQELRSRCLTVQSTQACGILQGLANADDIDPRNLGSHSGGCH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-34 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-33 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 6e-33 48
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-33 48
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-33 48
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-33 48
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-33 48
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-33 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HEAR1617 YP_001099902.1 transcriptional regulator CadR BAC0301 Protein 2e-43 66
HEAR1617 YP_001099902.1 transcriptional regulator CadR BAC0058 Protein 7e-38 58