|
Name : HEAR1151 (HEAR1151) Accession : YP_001099457.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Virulence Product : UDP-glucose 4-epimerase; nucleotide sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1169066 - 1171045 bp Length : 1980 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme DNA sequence : ATGAAGCCTTTTCTCGAATTACCGCGTTTTCAAAAACAGCTGATCGCCGCTACAGCCGATCTGCTTTTATTACCACTGAC TTTTTATCTGTCAGTATTACTGCGTTACGACAGCAGTACGCCGCAGTTATTCCAGATGTATTTCTGGATGATAGTCGCGG CGCCGCTGATTTCTATTCCGATTTTTCTCAAGCTGGGCCTTTATCGCGCGGTAATCCGTTTTATCGACCAAAAAATCGTC TATGTGGTTGTGCTGGGGGTAACGCTGTCGGTTATTTGCCTGGCAGCATTGGCGACCTTTACCCACACCGTCACCTTGTC ACGCGGGGTTTTTGGCATCTACTGGGTGAGCGCTATTCTGTACGTCGTCGCCAGTCGTTTCATGGCGCGCGGTTATCTGC TGCGGACAAATGATAAAAGCGGTGCGATACGCGTCGCCATTTATGGCGCCGGGCATTCAGGGATGCAGCTGGCCAGTGCA TTGCGTGCAGGGAGTGCATACCTTCCCGTGGCTTTGCTTGACGACAAAAAGGAATTGCAGGGAGCAACGATTGCCGGGGT AAAAGTATGGGCGCCGGATTGCCTACCTAAATTGGTTGCGGATAAACAGGTTCAGGAAATTCTGCTGGCAATGCCATCCT TGCGCAAGGCGGAGCAGAAGGTCATTCTTGAAAGACTGGAACCGCTTAAGATCAAGATCAAGGTGACGCCGCCGATTGCG AGCCTGATTAACGGTGAATTGCGGGTACAGGATATACGCGATATTGAAATTGAGGATTTATTAGGCCGCGATACGGTAGA ACCGAATGCGCAATTACTGACTACCTGTATTACCGGAAAAACCGTGTTGGTGACCGGGGCTGGCGGGTCGATAGGATCCG AATTATGTCGCCAGATCATTCGTTTGAAACCCAAGCGTCTGTTGTTACTGGATATATCGGAGTTTGCGCTGTATACGATT GAGCAGGATTTGCGGGCGATCGAACATGCCCATGATGAAAATATTGAATTGTTGCCGTTTCTCGGCTCGGTACTGGATGC GGAAAAGTGCGAACGTATTTTGCGTACCTTTGCAGTCGATACCATCTATCACGCAGCGGCGTACAAACATGTTCCGCTGG TTGAACACAATCCGATTCAGGGCATTCGCAATAATGCATTCGGCACCATGATGCTGGCGCAAGCTGCGATTGCTGCGAAA GTCGCGTGTTTTGTCCTCATTTCTACCGACAAGGCGGTACGTCCCACCAATGTGATGGGAACGACCAAGCGTCTGTCGGA GCTGATTTTGCAGGGGCTGTCGCGTGCGCAGAGCCAGACACGATTTTGCATGGTGCGTTTTGGTAATGTTTTGGGATCAT CTGGTTCCGTAGTGCCGCTGTTTCGCAAGCAAATCATGGCAGGCGGGCCGATTACATTGACTCATCCTGAAATTACCCGT TACTTCATGACCATACCGGAAGCGGCGCAACTCGTATTGCAGGCAGGTGCTATGGGCGAGGGCGGCGATGTCTTCGTGCT GGATATGGGCGAGCCGGTCAAGATTCTTGACCTCGCCACGCGCATGGTGCATCTCAGCGGACTGGAAGTGCGTAGCGCAT CCAATGAGTCCAGCGATGCGATCGAGATCAGGCATGTCGGCCTTCGTCCGGGCGAAAAATTGTATGAAGAGTTGCTGATC GGCTCCAATGTCGAAGGGACGCAACATCCCTTGATCATGCGTGCACAGGAAAACGAAATTCCATGGGCTGAGTTACAGAC GTTGTTGTTGCAACTGAAGCAGGCTTGTGAGCAGTTCGATTACGCTCAAGTACGTACCATGTTGCAGCGTATCGTGAGCG AATATACGCCGCAATGCGGAATAGAGGATTTGCTTTGGCTGGAAAAGAACGGCGCTTCGGGAGCCGATGATGATCTGTTA CTACAATTGGAATCTGATACGCCCATAGTCAAGCCTGGATTGCGGCAGGTGAGCCCGTAG Protein sequence : MKPFLELPRFQKQLIAATADLLLLPLTFYLSVLLRYDSSTPQLFQMYFWMIVAAPLISIPIFLKLGLYRAVIRFIDQKIV YVVVLGVTLSVICLAALATFTHTVTLSRGVFGIYWVSAILYVVASRFMARGYLLRTNDKSGAIRVAIYGAGHSGMQLASA LRAGSAYLPVALLDDKKELQGATIAGVKVWAPDCLPKLVADKQVQEILLAMPSLRKAEQKVILERLEPLKIKIKVTPPIA SLINGELRVQDIRDIEIEDLLGRDTVEPNAQLLTTCITGKTVLVTGAGGSIGSELCRQIIRLKPKRLLLLDISEFALYTI EQDLRAIEHAHDENIELLPFLGSVLDAEKCERILRTFAVDTIYHAAAYKHVPLVEHNPIQGIRNNAFGTMMLAQAAIAAK VACFVLISTDKAVRPTNVMGTTKRLSELILQGLSRAQSQTRFCMVRFGNVLGSSGSVVPLFRKQIMAGGPITLTHPEITR YFMTIPEAAQLVLQAGAMGEGGDVFVLDMGEPVKILDLATRMVHLSGLEVRSASNESSDAIEIRHVGLRPGEKLYEELLI GSNVEGTQHPLIMRAQENEIPWAELQTLLLQLKQACEQFDYAQVRTMLQRIVSEYTPQCGIEDLLWLEKNGASGADDDLL LQLESDTPIVKPGLRQVSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-77 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-75 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HEAR1151 | YP_001099457.1 | UDP-glucose 4-epimerase; nucleotide sugar epimerase | VFG0029 | Protein | 3e-125 | 51 |
