Gene Information

Name : MmarC5_0970 (MmarC5_0970)
Accession : YP_001097491.1
Strain : Methanococcus maripaludis C5
Genome accession: NC_009135
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 942003 - 942728 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP0635 ABC transporter:ATPase subunit

DNA sequence : 
ATGGCTTTAATTGAAACAAAGAATGTAATCAAGACGTATGGTATTGGCGAAGCTAAATCAAATGTATTGAAGGGTATTAA
TTTAAAAATTGAAGAAGGAGAATTTGTAATGATCATGGGCCCGAGTGGTTGTGGAAAATCCACTTTAATGAATATTTTGG
GTCTTTTAGATGTTCCCTCAAAGGGTGATGTTTACATAAAAGGTAAAAAAACCACAAAAATGAACGAAAACGAACGTGCA
GTATTCAGGCGAAAAATTAGTGGATTTATATTCCAGCAATTTCACTTAATTGGTACATTGACGGCTTTAGGAAATGTTGA
ACTTCCGATGACTCTGGATGGGAAAGATGAACATTTAAGGAGAAAGCGAGCCAAAGAACTATTGAGTATCGTCGGGCTCA
GTGAGCGGGAAAATTATAAACCCTCTCAACTCTCAGGTGGTCAGCAGCAAAGAGTCGCAATTGCAAGATCTCTTTCAAAT
AATCCAAAAGTACTGTTTGCAGATGAACCTACTGGAAATCTTGACAGTAAAAGCGGTAAACAGGTAATGGAGATACTTGA
AAATTTACATTCCGAAGGAATGACTGTTATTATGGTTACACATGACAATTACATGATAAAATATGCTACAAAAGTCATCC
GAATGAAAGATGGGGAAATCCTTGAAATTGATCGAGTTAAGGATGGCGAAGTTTTAGAAACTGAAGTTATTAAAAAAGAG
GAATAG

Protein sequence : 
MALIETKNVIKTYGIGEAKSNVLKGINLKIEEGEFVMIMGPSGCGKSTLMNILGLLDVPSKGDVYIKGKKTTKMNENERA
VFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKDEHLRRKRAKELLSIVGLSERENYKPSQLSGGQQQRVAIARSLSN
NPKVLFADEPTGNLDSKSGKQVMEILENLHSEGMTVIMVTHDNYMIKYATKVIRMKDGEILEIDRVKDGEVLETEVIKKE
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-39 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC5_0970 YP_001097491.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-51 52
MmarC5_0970 YP_001097491.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-40 46
MmarC5_0970 YP_001097491.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-43 44
MmarC5_0970 YP_001097491.1 ABC transporter-like protein NC_012469.1.7685735. Protein 4e-39 42
MmarC5_0970 YP_001097491.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC5_0970 YP_001097491.1 ABC transporter-like protein VFG0869 Protein 4e-25 42