Gene Information

Name : MmarC5_0392 (MmarC5_0392)
Accession : YP_001096923.1
Strain : Methanococcus maripaludis C5
Genome accession: NC_009135
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 353478 - 354242 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP1198 nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit

DNA sequence : 
ATGTCAGTTCTAGAACTTAAAAATCTTATCAAAAAATTTGGAAACAGTAAAAAAGACCTTGTTGCAGTTGATAATGTAGA
TTTATCTGTACAACATAACGAATTTGTATCAATTGTTGGCCCCAGCGGCTGTGGAAAATCCACAATCTTAAGAATGATTG
CAGGACTTGAAAATCCAACATCCGGAGGAATTTACCTCGATAAAAAGGACGTTTTAGGCCCTGATGCAGATAGAGGAATG
GTATTTCAACAGTACACCCTTCTTCCTTGGAAAACAGTTCTTCAAAATGTTACTTTTGGACTTGAAATTAAAAACGTTCC
AAAGGAAGAAAGAATTGAAATTGCTAAAAAATTTATAAAAATGGTTGGACTTGAAGAATTTTGCGATTCTTACCCTTACG
AATTAAGTGGCGGAATGCAACAAAGAGTTGCAATTGCTAGAACTCTTGCAAATGACCCCAAAATTGTACTGATGGATGAG
CCATTTGGAGCCCTCGATACACAGACAAGAGCAGTGTTACAGGATCACCTCTTAAAAATATGGGAAAGTGAAAAAAAGAC
CGTTGTTTTTGTAACGCACAGTGTTGATGAAGCAGTTTATCTGTCAGACCGTGTTGTTGTCATGACTGCACGACCTGGAA
AAATAAAATGCATTATTGATATAGATTTGGGCCGACCAAGAAAAAGAACAAGTGTCGAGTTCTTAGAATACAAGAAAAAA
ATAATTGACGAGTTAAAATCCGAAGTTTTAAAAACTTACGTATAA

Protein sequence : 
MSVLELKNLIKKFGNSKKDLVAVDNVDLSVQHNEFVSIVGPSGCGKSTILRMIAGLENPTSGGIYLDKKDVLGPDADRGM
VFQQYTLLPWKTVLQNVTFGLEIKNVPKEERIEIAKKFIKMVGLEEFCDSYPYELSGGMQQRVAIARTLANDPKIVLMDE
PFGALDTQTRAVLQDHLLKIWESEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKCIIDIDLGRPRKRTSVEFLEYKKK
IIDELKSEVLKTYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-30 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-29 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC5_0392 YP_001096923.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-32 41