Gene Information

Name : MmarC5_0223 (MmarC5_0223)
Accession : YP_001096754.1
Strain : Methanococcus maripaludis C5
Genome accession: NC_009135
Putative virulence/resistance : Resistance
Product : hexapaptide repeat-containing transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 192708 - 193388 bp
Length : 681 bp
Strand : -
Note : PFAM: transferase hexapeptide repeat containing protein; KEGG: mmp:MMP1355 bacterial transferase hexapeptide repeat

DNA sequence : 
TTGAATTCAAATCCATTTGAAACTTATAGGGATATTAGAATAATGAACGAAAACCCGAAATACCCTGTAAGAGGGGACGG
AATAGTTCGTGAAAAAATAGAAAGTGAAAACGTCGAAATTGGAGAATATACTTACTATTCGGGATACTACGAAGGAAAAA
AGTTTAAAGACTGCATAATGTATCTTGATGAAATCGACAATTGCAAAAACATGGATAAATTATTTATTGGTAAATTCTGC
AGTATTGCATCAGGCGTTAAATTCATAATGGGTGGAAATCAGGGCCATAGATACGACTGGATTTCAACTTATCCACTAAC
TTTGATTTCTGAAACTCCTGAAGATTTAAAATCCGAAAATGGAAAAGGATATTTGAAAAAAGGAGATACGGTAATTGAAA
ACGATGTCTGGATCGGTGCAAACGTAACAATTATGCCTGGCGTAAAAATTGGCAACGGTGCAGTAGTTGCAACAGGAAGC
ATTGTTACAAAAGAAGTTCCTCCCTATACAATAGTTGGTGGAAATCCTGCAAAAATAATTAAAAAAAGATTTTCTGACGA
AAAAATAGAACTTCTTTTGAAAATAAAATGGTGGGACTGGCCAATTGAAAAAATTAAAGCGAGTATCAAGACTTTAATGA
GCGATGACTTTGAAGAATTAAAAAAGATTTGCGAAGAATAA

Protein sequence : 
MNSNPFETYRDIRIMNENPKYPVRGDGIVREKIESENVEIGEYTYYSGYYEGKKFKDCIMYLDEIDNCKNMDKLFIGKFC
SIASGVKFIMGGNQGHRYDWISTYPLTLISETPEDLKSENGKGYLKKGDTVIENDVWIGANVTIMPGVKIGNGAVVATGS
IVTKEVPPYTIVGGNPAKIIKKRFSDEKIELLLKIKWWDWPIEKIKASIKTLMSDDFEELKKICEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-41 55
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-41 55
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-40 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase AY740681.1.gene5.p01 Protein 8e-42 55
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase AF322577.2.gene4.p01 Protein 8e-42 55
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase AY123251.gene2.p01 Protein 7e-41 52
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase JF268688.1.gene6.p01 Protein 5e-39 50
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase NC_002516.2.878374.p Protein 5e-39 49
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase AM180355.1.gene2499. Protein 3e-30 47
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase NC_011595.7057349.p0 Protein 5e-27 45
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase NC_010410.6000796.p0 Protein 5e-27 45
MmarC5_0223 YP_001096754.1 hexapaptide repeat-containing transferase NC_011586.7045146.p0 Protein 4e-27 45