Gene Information

Name : MmarC5_1573 (MmarC5_1573)
Accession : YP_001098084.1
Strain : Methanococcus maripaludis C5
Genome accession: NC_009135
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1518076 - 1518975 bp
Length : 900 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAAAAAATTAGGAACAGACCTTTTGAAAAGAGGATTTGCTAAAATGGTAAAACACGGGGTTGTAATGGATGTTACAAA
CGTGGAACAGGCACAAATTGCAGAAGATGCAGGTGCTGCTGCAGTAATGGCTTTGGAAAGAGTTCCTGCAGATATTAGGG
TACAAGGCGGCGTTGCAAGAATGTCCGACCCAGAAATGATTTTAGAAATTAAAGATGCAGTATCAATTCCAGTAATGGCA
AAAGCAAGAATTGGACACTACGTAGAAGCGCAAGTGTTAGAATCAATCGGTGTTGACATGGTTGACGAGAGTGAAGTTTT
AACTCCTGCTGACGAAGTAAACCACATCGATAAAAGAGCATTTACCGCACCATTCGTTTGTGGTGCAAGAAATTTGGGCG
AAGCTTTGAGAAGAATTGATGAAGGAGCAGCAATGATTAGGACCAAGGGGGAAGCTGGAACTGGAAACGTTGTCGAAGCT
GTAAAACACATGAGAGCAGTTAACGAAGGAATTGCAAGAGTTGTGGGCTACAAAGAAATGGGTCTTGAAGCAGAATTAAT
TCAAATGGCAAGAAACGAATTAAAAGTTCCAATGGAACTCATTTCAGAAGTTGCAGAACTTAAAAGACTCCCTGTTGTAA
ACTTTGCAGCTGGGGGAATTGCAACACCTGCAGATGCAGCTTTAATGATGCAGATGGGCTGTGATGGAGTATTTGTTGGA
TCAGGAATTTTCAAATCCGGAAACCCTGAAGTAAGAGCAAAAGCAATCGTTGAAGCAACCTACAACTTCGATAAAGCAGA
CGTAATCGGAGAAGTAAGCAAAAACTTAGGGGAAGCAATGGTTGGAATAAATATCGATGAAATTCCGGAAGAAAAGCTTC
TCGCAAAAAGAGGTATCTAA

Protein sequence :
MKKLGTDLLKRGFAKMVKHGVVMDVTNVEQAQIAEDAGAAAVMALERVPADIRVQGGVARMSDPEMILEIKDAVSIPVMA
KARIGHYVEAQVLESIGVDMVDESEVLTPADEVNHIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEA
VKHMRAVNEGIARVVGYKEMGLEAELIQMARNELKVPMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGCDGVFVG
SGIFKSGNPEVRAKAIVEATYNFDKADVIGEVSKNLGEAMVGINIDEIPEEKLLAKRGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-74 66
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-74 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-74 66