Gene Information

Name : MmarC5_1084 (MmarC5_1084)
Accession : YP_001097601.1
Strain : Methanococcus maripaludis C5
Genome accession: NC_009135
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1038241 - 1038945 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP0523 ABC transporter ATP-binding protein

DNA sequence : 
ATGTACAAAATTATAAGTCTTGAAGATGTTTGGAAAATCTACCAGATGGGTGAAGTTGAAGTTCAGGCCTTGAAGGGAGT
TTCACTCGATATAAATAAAGGTGATTTTGTCGCAATTGTCGGGTCGTCAGGTTCTGGAAAATCGACCATGATGAATATGA
TCGGATGCCTTGATGTACCAACAAAAGGTGATGTTTACCTTAAATCAAAAAATATCTCAGATATGACTGAATCAGAACTA
TCTGAACTTCGTGGAAAAACAATTGGTTTTGTATTTCAGCAATACAATTTAATTCCAAACATGACTGCACTTGAAAACGT
ACTTTTACCACTGCAAATACAGGAAGTCAATGATTCTACTGCAGATCGAGCTGCAAAAAGAGCATTAAAACAGGTTGGCC
TGGAAGACAGAATGAATAACAAACCATCCCAGCTTTCTGGAGGTCAACAACAGCGAGTATCGATTGCAAGAGCGTTAGCA
TGTGAACCAGAAATAATTCTTGCAGATGAACCAACAGGGGCGCTCGACAGTGCGACAGGTGAAGAAATTATAAAATTATT
TATGGCCCTCTGGGAAAGTGGGAAAACCATTATTATGATTACACACGACCCGAATCTTGCGAAATATGCGAAGACCATTG
TTGAATTAAAAGACGGAAAAATTATCAGTATAACAGATAACAAACAAAATACAGTTCATGAGTGA

Protein sequence : 
MYKIISLEDVWKIYQMGEVEVQALKGVSLDINKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKGDVYLKSKNISDMTESEL
SELRGKTIGFVFQQYNLIPNMTALENVLLPLQIQEVNDSTADRAAKRALKQVGLEDRMNNKPSQLSGGQQQRVSIARALA
CEPEIILADEPTGALDSATGEEIIKLFMALWESGKTIIMITHDPNLAKYAKTIVELKDGKIISITDNKQNTVHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-27 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC5_1084 YP_001097601.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-53 50
MmarC5_1084 YP_001097601.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-44 45
MmarC5_1084 YP_001097601.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-43 45
MmarC5_1084 YP_001097601.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-43 44
MmarC5_1084 YP_001097601.1 ABC transporter-like protein NC_012469.1.7685735. Protein 7e-37 41