|
Name : Shew_0752 (Shew_0752) Accession : YP_001092883.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 852283 - 854277 bp Length : 1995 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCATCTCGTAAAGAACTCGCAAACGCTATCCGTGTGTTAAGTATGGATGCCGTTCAGAAAGCCAACTCTGGTCACCC AGGTGCGCCATTGGGAATGGCCGATATCGCCGAAGTGTTGTGGAATGATTTCCTGAAGCACAACCCGAACAACCCAGAGT GGGTCGACCGCGACCGTTTCATCCTTTCAAACGGCCACGGCTCTATGCTGATTTACTCTCTGCTTCACCTGACGGGTTAT GCATTGCCGATGGATGAGCTGAAGAACTTCCGTCAGCTGCACTCTAAGACGCCGGGTCATCCTGAATATGGTTACACACC GGGTGTTGAAACCACTACAGGTCCACTGGGCGCGGGTATCAGCAACGCCGTAGGTATGGCGATTGCCGAGAAGACTCTGG CGGCGCAATTTAACCGTCCTGGCCATGACATTGTCGACCACTACACCTACTGCTTCCTGGGTGACGGCTGTCTGATGGAA GGTATCTCTCACGAGGCCTGTTCTCTGGCGGGTACCCTAGGTCTTGGCAAGCTGATTGCCTTTTGGGATGACAACGGCAT CTCTATCGACGGTCACGTCGAAGGCTGGTTCACCGACGATACCGCCAAGCGTTTCGAATCTTACGGCTGGCATGTGATTG CCGGTGTCGATGGCCACGACAGCGATGCTATCCGCAAGGCAATCGAAGAAGCCAAGTCAGTTACCGACAAGCCAACTATG ATCTGCTGCAAGACCATTATCGGTTTCGGTTCACCAAACAAGTCTGGCAGCCACGACTGTCACGGCGCGCCACTGGGCGA TGCCGAAATTGCGGCTGCTCGTGAGTTCCTGGGTTGGGAACACGGTCCATTTGAGATCCCTGCAGACGTTTACGCGGGTT GGGATGCCAAAGAAGTGGGCGCGGCGAACGAATCTAGCTGGAACGAGAAGCTTGCTGCCTATGAAGCCGCTTACCCAGAG CTGGCGGCGGAATATAAGCGCCGCGTGATCACTGGTGAACTGCCAGCCGATTTCGAAGAGAAGGCACAGGCCTTCATCAA AGAGTGTCAAGAGAAGGGCGAAAACATCGCCAGCCGTAAGGCATCACAAAACGCTATCGCGGCCTTCGGCGCTGTCCTGC CTGAACTGCTCGGCGGCTCGGCTGACCTGGCCGGTTCTAACCTGACCCTATGGTCTGGTTCTAAGGGCATTCAGGAAGAT CCAGCCGGTAACTACATCTACTACGGTGTGCGTGAGTTCGGTATGAGCGGCATCATGAACGGTGTGTCGCTGCACGGTGG TTTCATCAACTATGGCGCGACCTTCATGATGTTTATGGAATATGCGCGTAACGCGGTACGTATGTCTGCGCTGATGGGCA TTCAAAACATCTTCGTTTACACCCACGACTCTATCGGTCAGGGTGAAGATGGCCCGACTCACCAACCGGTTGAGCAGCTG GCTAACCTGCGCATGACACCAAACATGATGGTATGGCGTCCATGTGATGCGGCGGAAACTGCCGTAGCTTGGAAGATGGC TATCGAGCGTCGTAACGCGCCGACTTCACTGGTATTCAGCCGTCAGGGTCTGCCTGCTCAGCCACGCAGCGAAGAGCAAC TGGCTAACATCGCCAAGGGTGCTTATGTGTTGCAAGATTGCGCCGGCACGCCAGATCTAATCCTGATCGCAACCGGTAGT GAGGTGCAGCTGGCACTGGATTCGGCTAAGGCGCTGACCGAGCAAGGTAAGGCGGTACGCGTGGTCTCTATGCCATCTAC CGACGTGTTTGACGCGCAAGACGCTGACTACAAAGAGTCTGTACTGCCTAAGTCAGTCACTAAGCGTGTGGCCATCGAAG CGGCTCACGTCGATTACTGGCACAAGTATGTCGGTTTCGACGGCGCCATCGTTGGCATGACCACCTTCGGTGAGTCTGCT CCAGGCGGCGCGCTGATGAAGCACTTCGGCTTCACCGTTGAGAATGTGGTTGCCAAGGCAAGCGCTATTCTCTAA Protein sequence : MSSRKELANAIRVLSMDAVQKANSGHPGAPLGMADIAEVLWNDFLKHNPNNPEWVDRDRFILSNGHGSMLIYSLLHLTGY ALPMDELKNFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNRPGHDIVDHYTYCFLGDGCLME GISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFTDDTAKRFESYGWHVIAGVDGHDSDAIRKAIEEAKSVTDKPTM ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWEHGPFEIPADVYAGWDAKEVGAANESSWNEKLAAYEAAYPE LAAEYKRRVITGELPADFEEKAQAFIKECQEKGENIASRKASQNAIAAFGAVLPELLGGSADLAGSNLTLWSGSKGIQED PAGNYIYYGVREFGMSGIMNGVSLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMMVWRPCDAAETAVAWKMAIERRNAPTSLVFSRQGLPAQPRSEEQLANIAKGAYVLQDCAGTPDLILIATGS EVQLALDSAKALTEQGKAVRVVSMPSTDVFDAQDADYKESVLPKSVTKRVAIEAAHVDYWHKYVGFDGAIVGMTTFGESA PGGALMKHFGFTVENVVAKASAIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 74 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 67 |
