Gene Information

Name : Shew_0607 (Shew_0607)
Accession : YP_001092738.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 685873 - 686445 bp
Length : 573 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_0508 4Fe-4S ferredoxin, iron-sulfur binding domain protein

DNA sequence : 
ATGAGTAAAAGATATGTAATGGTGCACGACGAGAACCGCTGCATCGGCTGTCAGGCCTGTAGCGTCGCCTGTCGCAGCGA
AAATGGCGTCCCCGAGGGAGTCACCCGCTTGCAAGTGCGCGTAGAAGGCCCCTTCGGCGATGCGCCGCACCTGCACTTTA
AATATAACCGCGTCTCCTGCCAGCAGTGTGAGAACGCCCCCTGCGTCACCGTCTGTCCGACGGGTGCGGCCTATGTGGGC
GACGATGGCCTGGTCTCCATCAAGGAAGATAAATGCGTCGGCTGTATGTACTGTGTGGCGGCCTGCCCCTACAAGGTGCG
TTTCATCAACCCTGAAACCAAGGCGGCCGACAAGTGTAACTTCTGTAAGGACACCCGCCTGGCCCGCGGCGAGCTGCCCG
CCTGTGTGACCGTGTGTCCCACAGATGCACTGACCTTTGGCGATGCCAATGACCCGAGCAGCGAGGTAGCCAAACTCATC
AACACCAAAGCGACCTATCAGGAGAAGACCCATCTGGGGACCAAGCCTAGGGTCTATCGCATTCCAACGAAACGTGGGGG
GATACAGTCATGA

Protein sequence : 
MSKRYVMVHDENRCIGCQACSVACRSENGVPEGVTRLQVRVEGPFGDAPHLHFKYNRVSCQQCENAPCVTVCPTGAAYVG
DDGLVSIKEDKCVGCMYCVAACPYKVRFINPETKAADKCNFCKDTRLARGELPACVTVCPTDALTFGDANDPSSEVAKLI
NTKATYQEKTHLGTKPRVYRIPTKRGGIQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-31 45
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-31 45
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-31 45
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 9e-32 45
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew_0607 YP_001092738.1 4Fe-4S ferredoxin VFG0486 Protein 4e-32 45